Guide to the Human Genome
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Name: ASPH Sequence: fasta or formatted (299aa) NCBI GI: 14589864
Description:

aspartate beta-hydroxylase isoform b

Referenced in:

Additional Protein Modifications

Other entries for this name:
alt prot [313aa] aspartate beta-hydroxylase isoform c
alt prot [210aa] aspartate beta-hydroxylase isoform d
alt prot [758aa] aspartate beta-hydroxylase isoform a
alt prot [225aa] aspartate beta-hydroxylase isoform e
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         15           1
 C cysteine            0.3          1           1
 D aspartate           9.7         29           2
 E glutamate          18.4         55           2
 F phenylalanine       3.0          9           2
 G glycine             5.4         16           2
 H histidine           3.7         11           2
 I isoleucine          2.7          8           1
 K lysine              3.3         10           1
 L leucine             6.0         18           2
 M methionine          2.3          7           2
 N asparagine          2.3          7           1
 P proline             6.4         19           2
 Q glutamine           5.7         17           2
 R arginine            1.7          5           1
 S serine              5.0         15           2
 T threonine           5.4         16           1
 V valine             10.4         31           2
 W tryptophan          1.0          3           1
 Y tyrosine            2.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   aspartate beta-hydroxylase isoform b 
ASPH                  0.920   aspartate beta-hydroxylase isoform c 
ASPH                  0.916   aspartate beta-hydroxylase isoform a 
ASPH                  0.304   aspartate beta-hydroxylase isoform e 
ASPH                  0.237   aspartate beta-hydroxylase isoform d 
MYST3                 0.046   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.046   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.046   MYST histone acetyltransferase (monocytic leukemia)...
MYT1                  0.041   myelin transcription factor 1 
TRDN                  0.038   triadin 
WDR87                 0.034   NYD-SP11 protein 
RP1L1                 0.034   retinitis pigmentosa 1-like 1 
CDC2L2                0.032   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.032   cell division cycle 2-like 2 isoform 1 
TTN                   0.031   titin isoform N2-A 
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.031   cell division cycle 2-like 1 (PITSLRE proteins) isof...
FGD5                  0.031   FYVE, RhoGEF and PH domain containing 5 
SETD1B                0.029   SET domain containing 1B 
NCL                   0.029   nucleolin 
PELP1                 0.029   proline, glutamic acid and leucine rich protein 1 [...
MYST4                 0.029   MYST histone acetyltransferase (monocytic leukemia)...
EIF5B                 0.029   eukaryotic translation initiation factor 5B 
HUWE1                 0.027   HECT, UBA and WWE domain containing 1 
GOLIM4                0.026   golgi integral membrane protein 4 
UNC13A                0.026   unc-13 homolog A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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