Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZC3H14 Sequence: fasta or formatted (571aa) NCBI GI: 50233814
Description:

zinc finger CCCH-type containing 14 isoform 3

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [735aa] zinc finger CCCH-type containing 14 isoform 5
alt prot [730aa] zinc finger CCCH-type containing 14 isoform 6
alt prot [736aa] zinc finger CCCH-type containing 14 isoform 1
alt prot [579aa] zinc finger CCCH-type containing 14 isoform 2
alt prot [306aa] zinc finger CCCH-type containing 14 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         31           2
 C cysteine            2.8         16           1
 D aspartate           4.9         28           3
 E glutamate           7.7         44           5
 F phenylalanine       3.2         18           2
 G glycine             2.5         14           1
 H histidine           2.3         13           2
 I isoleucine          3.3         19           1
 K lysine              7.4         42           2
 L leucine             6.7         38           2
 M methionine          1.9         11           1
 N asparagine          4.7         27           2
 P proline             9.5         54           2
 Q glutamine           5.4         31           4
 R arginine            6.3         36           2
 S serine             10.5         60           3
 T threonine           6.3         36           2
 V valine              6.3         36           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.3         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger CCCH-type containing 14 isoform 3 
ZC3H14                0.942   zinc finger CCCH-type containing 14 isoform 2 
ZC3H14                0.695   zinc finger CCCH-type containing 14 isoform 6 [Homo...
ZC3H14                0.695   zinc finger CCCH-type containing 14 isoform 5 [Homo...
ZC3H14                0.695   zinc finger CCCH-type containing 14 isoform 1 
ZC3H14                0.322   zinc finger CCCH-type containing 14 isoform 4 
CPSF4                 0.018   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.018   cleavage and polyadenylation specific factor 4, 30kDa...
ZC3H3                 0.013   zinc finger CCCH-type containing 3 
FBF1                  0.013   Fas (TNFRSF6) binding factor 1 
NEFM                  0.012   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.012   neurofilament, medium polypeptide 150kDa isoform 2 ...
SF3B2                 0.012   splicing factor 3B subunit 2 
ZC3H8                 0.011   zinc finger CCCH-type containing 8 
ZC3H6                 0.011   zinc finger CCCH-type domain containing 6 
MKRN2                 0.011   makorin ring finger protein 2 
CPSF4L                0.011   cleavage and polyadenylation specific factor 4-like...
TRDN                  0.010   triadin 
FAM13B                0.010   hypothetical protein LOC51306 isoform 3 
FAM13B                0.010   hypothetical protein LOC51306 isoform 2 
DNHD1                 0.009   dynein heavy chain domain 1 isoform 1 
AMPH                  0.009   amphiphysin isoform 2 
AMPH                  0.009   amphiphysin isoform 1 
FGD6                  0.009   FYVE, RhoGEF and PH domain containing 6 
FAM71E2               0.009   hypothetical protein LOC284418 
ABI3BP                0.009   ABI gene family, member 3 (NESH) binding protein [Ho...
MUC17                 0.009   mucin 17 
RNF8                  0.009   ring finger protein 8 isoform 2 
RNF8                  0.009   ring finger protein 8 isoform 1 
CCDC80                0.009   steroid-sensitive protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press