BRD8 26421

Name: BRD8	Sequence: fasta or formatted (951aa)		NCBI GI: 34452705
Description: bromodomain containing 8 isoform 1		Referenced in: Bromodomain Family Thyroid and Thyroid Hormone Receptor
Other entries for this name: alt prot [1235aa] bromodomain containing 8 isoform 2 alt prot [757aa] bromodomain containing 8 isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 82 3 C cysteine 0.8 8 1 D aspartate 6.1 58 2 E glutamate 10.6 101 4 F phenylalanine 2.0 19 1 G glycine 5.8 55 2 H histidine 1.8 17 1 I isoleucine 4.9 47 2 K lysine 5.4 51 3 L leucine 7.3 69 2 M methionine 3.3 31 2 N asparagine 2.0 19 1 P proline 8.8 84 3 Q glutamine 4.0 38 2 R arginine 3.9 37 2 S serine 9.6 91 2 T threonine 6.4 61 2 V valine 7.0 67 2 W tryptophan 0.6 6 1 Y tyrosine 1.1 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 bromodomain containing 8 isoform 1 BRD8 0.842 bromodomain containing 8 isoform 2 BRD8 0.768 bromodomain containing 8 isoform 3 BRD3 0.024 bromodomain containing protein 3 BRD4 0.023 bromodomain-containing protein 4 isoform short BRD4 0.023 bromodomain-containing protein 4 isoform long BRD2 0.023 bromodomain containing 2 BRD2 0.023 bromodomain containing 2 EP300 0.021 E1A binding protein p300 BRD7 0.020 bromodomain containing 7 BPTF 0.019 bromodomain PHD finger transcription factor isoform ... BPTF 0.019 bromodomain PHD finger transcription factor isoform ... CREBBP 0.019 CREB binding protein isoform b CREBBP 0.019 CREB binding protein isoform a BRD9 0.018 bromodomain containing 9 isoform 1 BRD9 0.018 bromodomain containing 9 isoform 2 CECR2 0.018 cat eye syndrome chromosome region, candidate 2 [Ho... BRDT 0.018 testis-specific bromodomain protein BRDT 0.018 testis-specific bromodomain protein MUC2 0.018 mucin 2 precursor BAZ2B 0.017 bromodomain adjacent to zinc finger domain, 2B [Homo... BRPF3 0.017 bromodomain and PHD finger containing, 3 NACA 0.017 nascent polypeptide-associated complex alpha subuni... NFRKB 0.017 nuclear factor related to kappaB binding protein is... NFRKB 0.017 nuclear factor related to kappaB binding protein iso... BAZ1B 0.017 bromodomain adjacent to zinc finger domain, 1B [Homo... MUC17 0.016 mucin 17 SMARCA4 0.016 SWI/SNF-related matrix-associated actin-dependent r... LOC100131514 0.016 PREDICTED: similar to hCG1747327, partial SMARCA4 0.016 SWI/SNF-related matrix-associated actin-dependent r... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.