Guide to the Human Genome
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Name: ZC3H14 Sequence: fasta or formatted (579aa) NCBI GI: 50233812
Description:

zinc finger CCCH-type containing 14 isoform 2

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [735aa] zinc finger CCCH-type containing 14 isoform 5
alt prot [730aa] zinc finger CCCH-type containing 14 isoform 6
alt prot [736aa] zinc finger CCCH-type containing 14 isoform 1
alt prot [571aa] zinc finger CCCH-type containing 14 isoform 3
alt prot [306aa] zinc finger CCCH-type containing 14 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         31           2
 C cysteine            2.8         16           1
 D aspartate           5.0         29           3
 E glutamate           8.3         48           5
 F phenylalanine       3.1         18           2
 G glycine             2.8         16           1
 H histidine           2.2         13           2
 I isoleucine          4.0         23           1
 K lysine              7.8         45           2
 L leucine             6.4         37           2
 M methionine          1.7         10           1
 N asparagine          4.7         27           2
 P proline             9.3         54           2
 Q glutamine           4.5         26           4
 R arginine            6.2         36           2
 S serine             10.4         60           3
 T threonine           6.0         35           2
 V valine              6.2         36           2
 W tryptophan          0.7          4           1
 Y tyrosine            2.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger CCCH-type containing 14 isoform 2 
ZC3H14                0.928   zinc finger CCCH-type containing 14 isoform 3 
ZC3H14                0.701   zinc finger CCCH-type containing 14 isoform 6 [Homo...
ZC3H14                0.701   zinc finger CCCH-type containing 14 isoform 5 [Homo...
ZC3H14                0.701   zinc finger CCCH-type containing 14 isoform 1 
ZC3H14                0.285   zinc finger CCCH-type containing 14 isoform 4 
CPSF4                 0.020   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.020   cleavage and polyadenylation specific factor 4, 30kDa...
NEFM                  0.016   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.016   neurofilament, medium polypeptide 150kDa isoform 2 ...
ZC3H3                 0.012   zinc finger CCCH-type containing 3 
SF3B2                 0.012   splicing factor 3B subunit 2 
TRDN                  0.011   triadin 
NOLC1                 0.010   nucleolar and coiled-body phosphoprotein 1 
HUWE1                 0.010   HECT, UBA and WWE domain containing 1 
CPSF4L                0.010   cleavage and polyadenylation specific factor 4-like...
ZC3H8                 0.010   zinc finger CCCH-type containing 8 
LOC642622             0.009   PREDICTED: similar to hCG1798126 
LOC642622             0.009   PREDICTED: similar to hCG1798126, partial 
LOC642622             0.009   PREDICTED: similar to hCG1798126 
MGA                   0.009   MAX gene associated 
FGD6                  0.009   FYVE, RhoGEF and PH domain containing 6 
AMPH                  0.009   amphiphysin isoform 2 
AMPH                  0.009   amphiphysin isoform 1 
ZC3H6                 0.009   zinc finger CCCH-type domain containing 6 
CCDC80                0.009   steroid-sensitive protein 1 
CCDC80                0.009   steroid-sensitive protein 1 
L1TD1                 0.009   LINE-1 type transposase domain containing 1 
MUC17                 0.009   mucin 17 
DNHD1                 0.009   dynein heavy chain domain 1 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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