Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZC3H14 Sequence: fasta or formatted (736aa) NCBI GI: 40804742
Description:

zinc finger CCCH-type containing 14 isoform 1

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [735aa] zinc finger CCCH-type containing 14 isoform 5
alt prot [730aa] zinc finger CCCH-type containing 14 isoform 6
alt prot [579aa] zinc finger CCCH-type containing 14 isoform 2
alt prot [571aa] zinc finger CCCH-type containing 14 isoform 3
alt prot [306aa] zinc finger CCCH-type containing 14 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         39           2
 C cysteine            2.3         17           1
 D aspartate           5.4         40           3
 E glutamate           7.7         57           5
 F phenylalanine       3.0         22           2
 G glycine             3.4         25           1
 H histidine           2.3         17           2
 I isoleucine          3.5         26           1
 K lysine              7.2         53           2
 L leucine             7.5         55           2
 M methionine          2.6         19           1
 N asparagine          4.3         32           2
 P proline             9.0         66           2
 Q glutamine           5.4         40           4
 R arginine            5.8         43           2
 S serine             10.2         75           3
 T threonine           5.7         42           2
 V valine              6.2         46           3
 W tryptophan          0.5          4           1
 Y tyrosine            2.4         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger CCCH-type containing 14 isoform 1 
ZC3H14                0.996   zinc finger CCCH-type containing 14 isoform 5 [Homo...
ZC3H14                0.985   zinc finger CCCH-type containing 14 isoform 6 [Homo...
ZC3H14                0.553   zinc finger CCCH-type containing 14 isoform 2 
ZC3H14                0.541   zinc finger CCCH-type containing 14 isoform 3 
ZC3H14                0.223   zinc finger CCCH-type containing 14 isoform 4 
CPSF4                 0.014   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.014   cleavage and polyadenylation specific factor 4, 30kDa...
ZC3H3                 0.010   zinc finger CCCH-type containing 3 
NEFM                  0.010   neurofilament, medium polypeptide 150kDa isoform 1 ...
NEFM                  0.010   neurofilament, medium polypeptide 150kDa isoform 2 ...
SF3B2                 0.010   splicing factor 3B subunit 2 
ZC3H8                 0.009   zinc finger CCCH-type containing 8 
NOLC1                 0.008   nucleolar and coiled-body phosphoprotein 1 
FAM71E2               0.008   hypothetical protein LOC284418 
ABI3BP                0.008   ABI gene family, member 3 (NESH) binding protein [Ho...
MKRN2                 0.008   makorin ring finger protein 2 
RTN4                  0.008   reticulon 4 isoform A 
LOC100290485          0.008   PREDICTED: hypothetical protein XP_002346633 
CPSF4L                0.008   cleavage and polyadenylation specific factor 4-like...
RNF8                  0.007   ring finger protein 8 isoform 2 
RNF8                  0.007   ring finger protein 8 isoform 1 
TRDN                  0.007   triadin 
AMPH                  0.007   amphiphysin isoform 2 
AMPH                  0.007   amphiphysin isoform 1 
ZC3H6                 0.007   zinc finger CCCH-type domain containing 6 
FGD6                  0.007   FYVE, RhoGEF and PH domain containing 6 
MUC17                 0.007   mucin 17 
DNHD1                 0.007   dynein heavy chain domain 1 isoform 1 
TNRC6A                0.007   trinucleotide repeat containing 6A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press