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Search of human proteins with 14589961
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
(93 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 198 7e-52
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 186 3e-48
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 97 4e-21
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 97 4e-21
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 94 2e-20
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 92 9e-20
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 92 9e-20
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 91 3e-19
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 82 9e-17
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 77 2e-15
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 76 5e-15
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 74 3e-14
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 72 7e-14
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 72 1e-13
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 71 2e-13
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 66 7e-12
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 63 4e-11
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 62 1e-10
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 60 5e-10
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 60 5e-10
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 58 1e-09
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 57 2e-09
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 52 8e-08
gi|4506833 small inducible cytokine A1 precursor [Homo sapiens] 51 2e-07
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 47 3e-06
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 47 3e-06
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 43 6e-05
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 42 1e-04
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens] 38 0.002
gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo sap... 37 0.004
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 198 bits (504), Expect = 7e-52
Identities = 93/93 (100%), Positives = 93/93 (100%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
Query: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 93
KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN
Sbjct: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 93
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 186 bits (473), Expect = 3e-48
Identities = 92/109 (84%), Positives = 93/109 (85%), Gaps = 16/109 (14%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSR----------------GPYHPSECCFTYTTYKI 44
MKISVAAIPFFLLITIALGTKTESSS+ GPYHPSECCFTYTTYKI
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKI 60
Query: 45 PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 93
PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN
Sbjct: 61 PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 109
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
M++S AA+ LL T+AL + S+ P+ CCF+YT+ +IP+ I DY+ET+SQCS
Sbjct: 1 MQVSTAALAV-LLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCS 59
Query: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
KP ++F+TKRG VC +PS++WVQ Y+ D++
Sbjct: 60 KPSVIFLTKRGRQVCADPSEEWVQKYVSDLE 90
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 96.7 bits (239), Expect = 4e-21
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
M++S AA+ LL T+AL + S+ P+ CCF+YT+ +IP+ I DY+ET+SQCS
Sbjct: 1 MQVSTAALAV-LLCTMALCNQVLSAPLAADTPTACCFSYTSRQIPQNFIADYFETSSQCS 59
Query: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
KP ++F+TKRG VC +PS++WVQ Y+ D++
Sbjct: 60 KPSVIFLTKRGRQVCADPSEEWVQKYVSDLE 90
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 94.4 bits (233), Expect = 2e-20
Identities = 44/91 (48%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
M++S AA+ LL T+AL + S+S P+ CCF+YT+ +IP+ I DY+ET+SQCS
Sbjct: 1 MQVSTAALAV-LLCTMALCNQF-SASLAADTPTACCFSYTSRQIPQNFIADYFETSSQCS 58
Query: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
KPG++F+TKR VC +PS++WVQ Y+ D++
Sbjct: 59 KPGVIFLTKRSRQVCADPSEEWVQKYVSDLE 89
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 92.0 bits (227), Expect = 9e-20
Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
MK+ V + +L+ A + S+ G P+ CCF+YT K+PR ++DYYET+S CS
Sbjct: 1 MKLCVTVLSLLVLVA-AFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCS 59
Query: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 93
+P +VF TKRG VC +PS+ WVQ+Y+ D++ N
Sbjct: 60 QPAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 92.0 bits (227), Expect = 9e-20
Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 1/93 (1%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
MK+ V + +L+ A + S+ G P+ CCF+YT K+PR ++DYYET+S CS
Sbjct: 1 MKLCVTVLSLLVLVA-AFCSLALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCS 59
Query: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 93
+P +VF TKRG VC +PS+ WVQ+Y+ D++ N
Sbjct: 60 QPAVVFQTKRGKQVCADPSESWVQEYVYDLELN 92
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 90.5 bits (223), Expect = 3e-19
Identities = 40/93 (43%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
MK+ V + +L+ A + S+ G P+ CCF+YT K+PR ++DYYET+S CS
Sbjct: 1 MKLCVTVLSLLMLVA-AFCSPALSAPMGSDPPTACCFSYTARKLPRNFVVDYYETSSLCS 59
Query: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 93
+P +VF TKR VC +PS+ WVQ+Y+ D++ N
Sbjct: 60 QPAVVFQTKRSKQVCADPSESWVQEYVYDLELN 92
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 82.0 bits (201), Expect = 9e-17
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 35 CCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 93
CC YT+++IP++ I+DY ET+ QC KPG++ +TKRG +C +P+ KWVQ YI D+K N
Sbjct: 30 CCLVYTSWQIPQKFIVDYSETSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDLKLN 88
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 77.4 bits (189), Expect = 2e-15
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 21/111 (18%)
Query: 1 MKISVAAIPFFLLITIALGTKTESS---------SRGP---------YHPS--ECCFTYT 40
MK+SVAA+ +L+T ALG++ + S+ P +H + +CC +YT
Sbjct: 1 MKVSVAALSCLMLVT-ALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYT 59
Query: 41 TYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
IP + Y+ETNS+CSKPG++F+TK+G C NPSDK VQ ++ +K
Sbjct: 60 PRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 76.3 bits (186), Expect = 5e-15
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
MK+S AA+ L+ T + S P CCF Y +PR I +Y+ T+ +CS
Sbjct: 1 MKVSAAALAVILIATALCAPASASPYSSDTTP--CCFAYIARPLPRAHIKEYFYTSGKCS 58
Query: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
P +VF+T++ VC NP KWV++YI ++
Sbjct: 59 NPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 73.6 bits (179), Expect = 3e-14
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 18 LGTKTESSSRGPYHPS--ECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVC 75
+G + S +H + +CC +YT IP + Y+ETNS+CSKPG++F+TK+G C
Sbjct: 52 IGPQMTLSHAAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFC 111
Query: 76 TNPSDKWVQDYIKDMK 91
NPSDK VQ ++ +K
Sbjct: 112 ANPSDKQVQVCVRMLK 127
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 72.4 bits (176), Expect = 7e-14
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 5/92 (5%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYH---PSECCFTYTTYKIPRQRIMDYYETNS 57
MK+S AA+ +LI I + + + S + P PS CC Y +PR+ ++ Y + +
Sbjct: 1 MKVSEAALSLLVLILI-ITSASRSQPKVPEWVNTPSTCCLKYYEKVLPRRLVVGYRKALN 59
Query: 58 QCSKPGIVFITKRGHSVCTNPSDKWVQDYIKD 89
C P I+F+TKR VCTNP+D WVQ+YIKD
Sbjct: 60 -CHLPAIIFVTKRNREVCTNPNDDWVQEYIKD 90
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 72.0 bits (175), Expect = 1e-13
Identities = 38/110 (34%), Positives = 62/110 (56%), Gaps = 20/110 (18%)
Query: 1 MKISVAAIPFFLLITIALGTKTE---------SSSRGP----------YHPSECCFTYTT 41
MK+SVAA+ +L+ + LG++ + S+ P + ++CC +Y +
Sbjct: 1 MKVSVAALSCLMLVAV-LGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYIS 59
Query: 42 YKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
IP + Y+ET+S+CSKPG++F+TK+G VC PS VQD +K +K
Sbjct: 60 QSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 70.9 bits (172), Expect = 2e-13
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
MK+S A + LL+T A + + PS CCFT+++ KI QR+ Y T S+C
Sbjct: 1 MKVS-AVLLCLLLMTAAFNPQGLAQPDALNVPSTCCFTFSSKKISLQRLKSYVITTSRCP 59
Query: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDM 90
+ ++F TK G +C +P +KWVQ+Y+K +
Sbjct: 60 QKAVIFRTKLGKEICADPKEKWVQNYMKHL 89
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo
sapiens]
Length = 94
Score = 65.9 bits (159), Expect = 7e-12
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 1 MKISVA-AIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQC 59
M +S+A A+ L+++ LGT T RG CCF Y+ +P + Y T++ C
Sbjct: 2 MGLSLASAVLLASLLSLHLGTAT----RGSDISKTCCFQYSHKPLPWTWVRSYEFTSNSC 57
Query: 60 SKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
S+ ++F TKRG VCT+P KWVQ YI +K
Sbjct: 58 SQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 63.2 bits (152), Expect = 4e-11
Identities = 34/93 (36%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYE-TNSQC 59
MK+S AA+ LL+ + + P CCF KIP QR+ Y TN QC
Sbjct: 1 MKVS-AALLCLLLMAATFSPQGLAQPDSVSIPITCCFNVINRKIPIQRLESYTRITNIQC 59
Query: 60 SKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKE 92
K ++F TKRG VC +P ++WV+D +K + +
Sbjct: 60 PKEAVIFKTKRGKEVCADPKERWVRDSMKHLDQ 92
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 61.6 bits (148), Expect = 1e-10
Identities = 27/86 (31%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 5 VAAIPFFLLITIALGTKTES--SSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCSKP 62
+A + L+T+ LG + ++RG ECC Y IP +++ +Y+T+ CS+
Sbjct: 1 MAPLKMLALVTLLLGASLQHIHAARGTNVGRECCLEYFKGAIPLRKLKTWYQTSEDCSRD 60
Query: 63 GIVFITKRGHSVCTNPSDKWVQDYIK 88
IVF+T +G ++C++P++K V++ +K
Sbjct: 61 AIVFVTVQGRAICSDPNNKRVKNAVK 86
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 59.7 bits (143), Expect = 5e-10
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 32 PSECCFTYTTYKIPRQRIMDYY-ETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 90
PS CC + + +IP R++ Y + S C K G++F TK+G C +P +WVQ Y+K++
Sbjct: 30 PSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNL 89
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo
sapiens]
Length = 99
Score = 59.7 bits (143), Expect = 5e-10
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYET-NSQC 59
MK S AA+ LL A + + G + CC+ + KIP+QR+ Y T +S C
Sbjct: 1 MKAS-AALLCLLLTAAAFSPQGLAQPVGINTSTTCCYRFINKKIPKQRLESYRRTTSSHC 59
Query: 60 SKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 90
+ ++F TK +C +P+ KWVQD++K +
Sbjct: 60 PREAVIFKTKLDKEICADPTQKWVQDFMKHL 90
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 58.2 bits (139), Expect = 1e-09
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 6/90 (6%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYH-PSECCFTYTTYKIPRQRIMDYYE-TNSQ 58
MK+S AA+ + LLI A + GP P+ CCF KIP QR+ Y T+ +
Sbjct: 1 MKVS-AALLWLLLIAAAFSPQ---GLAGPASVPTTCCFNLANRKIPLQRLESYRRITSGK 56
Query: 59 CSKPGIVFITKRGHSVCTNPSDKWVQDYIK 88
C + ++F TK +C +P KWVQD +K
Sbjct: 57 CPQKAVIFKTKLAKDICADPKKKWVQDSMK 86
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 57.4 bits (137), Expect = 2e-09
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 12 LLITIALGTKTESSSRGPY----HPSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFI 67
L++ + L +++ GPY S CC Y Y++P + + +Y T+ C +PG+V +
Sbjct: 9 LVVLVLLAVALQATEAGPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSCPRPGVVLL 68
Query: 68 TKRGHSVCTNPSDKWVQDYIKDMKE 92
T R +C +P WV+ + + +
Sbjct: 69 TFRDKEICADPRVPWVKMILNKLSQ 93
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 52.4 bits (124), Expect = 8e-08
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYE-TNSQC 59
MK+S AA+ LLI + + P CC+ +T KI QR+ Y T+S+C
Sbjct: 1 MKVS-AALLCLLLIAATFIPQGLAQPDAINAPVTCCYNFTNRKISVQRLASYRRITSSKC 59
Query: 60 SKPGIVFITKRGHSVCTNPSDKWVQD 85
K ++F T +C +P KWVQD
Sbjct: 60 PKEAVIFKTIVAKEICADPKQKWVQD 85
>gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
Length = 96
Score = 51.2 bits (121), Expect = 2e-07
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCS 60
M+I A+ LL + S + P+ S CCF++ +IP + I+ Y T+S CS
Sbjct: 1 MQIITTALVCLLLAGMWPEDVDSKSMQVPF--SRCCFSFAEQEIPLRAILCYRNTSSICS 58
Query: 61 KPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 91
G++F KRG C + WVQ + K ++
Sbjct: 59 NEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 47.4 bits (111), Expect = 3e-06
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 36 CFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 90
C + TT ++P RI Y T ++ S ++FITKRG VC +P WV+D ++ M
Sbjct: 32 CVSLTTQRLPVSRIKTY--TITEGSLRAVIFITKRGLKVCADPQATWVRDVVRSM 84
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 47.4 bits (111), Expect = 3e-06
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 36 CFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 90
C + TT ++P RI Y T ++ S ++FITKRG VC +P WV+D ++ M
Sbjct: 32 CVSLTTQRLPVSRIKTY--TITEGSLRAVIFITKRGLKVCADPQATWVRDVVRSM 84
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 42.7 bits (99), Expect = 6e-05
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 12 LLITIALGT-KTESSSRGPYHPSECCFTYTTYKIPRQRIMDY--YETNSQCSKPGIVFIT 68
L++ +A G +T+ S G +CC Y+ KIP + + Y E + CS P I+F+
Sbjct: 10 LILVLAFGIPRTQGSDGGA---QDCCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLP 66
Query: 69 KRGH--SVCTNPSDKWVQDYIKDM 90
++ +C +P + WVQ ++ +
Sbjct: 67 RKRSQAELCADPKELWVQQLMQHL 90
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 41.6 bits (96), Expect = 1e-04
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 2/81 (2%)
Query: 13 LITIALGTKTESSSRGPYHPSECCFTYTTYKIPRQ--RIMDYYETNSQCSKPGIVFITKR 70
L + L T + G +CC + T IP R Y C P +VF T R
Sbjct: 7 LSLLVLWTSPAPTLSGTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLR 66
Query: 71 GHSVCTNPSDKWVQDYIKDMK 91
G +C P WV+ I+ ++
Sbjct: 67 GRQLCAPPDQPWVERIIQRLQ 87
>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
Length = 397
Score = 37.7 bits (86), Expect = 0.002
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 41 TYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 90
T KIP ++ Y + + C K I+ T++ C +P ++WV+D ++ +
Sbjct: 40 TSKIPVALLIHYQQNQASCGKRAIILETRQHRLFCADPKEQWVKDAMQHL 89
>gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo
sapiens]
Length = 95
Score = 36.6 bits (83), Expect = 0.004
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 34 ECCFTYTTYKIPRQRIMDYYE--TNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIK 88
+CC YT + + I+ + N C I+F TK+ SVC NP WV+ ++
Sbjct: 30 DCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVR 86
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,848,698
Number of Sequences: 37866
Number of extensions: 152000
Number of successful extensions: 294
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 239
Number of HSP's gapped (non-prelim): 57
length of query: 93
length of database: 18,247,518
effective HSP length: 64
effective length of query: 29
effective length of database: 15,824,094
effective search space: 458898726
effective search space used: 458898726
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.