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Search of human proteins with 14589959
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
(109 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor ... 229 5e-61
gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor ... 186 3e-48
gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens] 89 1e-18
gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Hom... 89 1e-18
gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Hom... 89 1e-18
gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Hom... 87 2e-18
gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Hom... 87 2e-18
gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Hom... 85 1e-17
gi|22538808 small inducible cytokine A23 isoform CKbeta8 precurs... 83 4e-17
gi|4506831 small inducible cytokine A18 precursor [Homo sapiens] 82 9e-17
gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo sapi... 79 6e-16
gi|22538806 small inducible cytokine A23 isoform CKbeta8-1 precu... 77 3e-15
gi|22538814 small inducible cytokine A5 precursor [Homo sapiens] 71 2e-13
gi|4759074 small inducible cytokine A16 precursor [Homo sapiens] 70 4e-13
gi|4885587 small inducible cytokine A13 precursor [Homo sapiens] 68 2e-12
gi|22538816 small inducible cytokine A8 precursor [Homo sapiens] 62 1e-10
gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens] 60 4e-10
gi|22165427 small inducible cytokine A24 precursor [Homo sapiens] 60 5e-10
gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens] 57 2e-09
gi|4506827 small inducible cytokine A11 precursor [Homo sapiens] 55 9e-09
gi|4506829 small inducible cytokine A17 precursor [Homo sapiens] 55 2e-08
gi|22538804 small inducible cytokine A22 precursor [Homo sapiens] 52 1e-07
gi|4506841 small inducible cytokine A2 precursor [Homo sapiens] 51 2e-07
gi|4506833 small inducible cytokine A1 precursor [Homo sapiens] 50 3e-07
gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens] 49 7e-07
gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens] 49 1e-06
gi|5454040 small inducible cytokine A19 precursor [Homo sapiens] 40 4e-04
gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens] 40 5e-04
gi|4506835 small inducible cytokine A21 precursor [Homo sapiens] 39 7e-04
gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo sap... 37 0.004
>gi|14589959 chemokine (C-C motif) ligand 14 isoform 2 precursor
[Homo sapiens]
Length = 109
Score = 229 bits (583), Expect = 5e-61
Identities = 109/109 (100%), Positives = 109/109 (100%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKI 60
MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKI
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKI 60
Query: 61 PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 109
PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN
Sbjct: 61 PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 109
>gi|14589961 chemokine (C-C motif) ligand 14 isoform 1 precursor
[Homo sapiens]
Length = 93
Score = 186 bits (473), Expect = 3e-48
Identities = 92/109 (84%), Positives = 93/109 (85%), Gaps = 16/109 (14%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKI 60
MKISVAAIPFFLLITIALGTKTESSS+ GPYHPSECCFTYTTYKI
Sbjct: 1 MKISVAAIPFFLLITIALGTKTESSSR----------------GPYHPSECCFTYTTYKI 44
Query: 61 PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 109
PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN
Sbjct: 45 PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 93
>gi|4506843 chemokine (C-C motif) ligand 3 [Homo sapiens]
Length = 92
Score = 88.6 bits (218), Expect = 1e-18
Identities = 33/60 (55%), Positives = 49/60 (81%)
Query: 48 PSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
P+ CCF+YT+ +IP+ I DY+ET+SQCSKPG++F+TKR VC +PS++WVQ Y+ D++
Sbjct: 30 PTACCFSYTSRQIPQNFIADYFETSSQCSKPGVIFLTKRSRQVCADPSEEWVQKYVSDLE 89
>gi|27477072 chemokine (C-C motif) ligand 3-like 1 precursor [Homo
sapiens]
Length = 93
Score = 88.6 bits (218), Expect = 1e-18
Identities = 33/60 (55%), Positives = 49/60 (81%)
Query: 48 PSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
P+ CCF+YT+ +IP+ I DY+ET+SQCSKP ++F+TKRG VC +PS++WVQ Y+ D++
Sbjct: 31 PTACCFSYTSRQIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLE 90
>gi|93589094 chemokine (C-C motif) ligand 3-like 3 precursor [Homo
sapiens]
Length = 93
Score = 88.6 bits (218), Expect = 1e-18
Identities = 33/60 (55%), Positives = 49/60 (81%)
Query: 48 PSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
P+ CCF+YT+ +IP+ I DY+ET+SQCSKP ++F+TKRG VC +PS++WVQ Y+ D++
Sbjct: 31 PTACCFSYTSRQIPQNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLE 90
>gi|47824887 chemokine (C-C motif) ligand 4-like 1 precursor [Homo
sapiens]
Length = 92
Score = 87.4 bits (215), Expect = 2e-18
Identities = 34/62 (54%), Positives = 48/62 (77%)
Query: 48 PSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
P+ CCF+YT K+PR ++DYYET+S CS+P +VF TKRG VC +PS+ WVQ+Y+ D++
Sbjct: 31 PTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
Query: 108 EN 109
N
Sbjct: 91 LN 92
>gi|46275832 chemokine (C-C motif) ligand 4-like 2 precursor [Homo
sapiens]
Length = 92
Score = 87.4 bits (215), Expect = 2e-18
Identities = 34/62 (54%), Positives = 48/62 (77%)
Query: 48 PSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
P+ CCF+YT K+PR ++DYYET+S CS+P +VF TKRG VC +PS+ WVQ+Y+ D++
Sbjct: 31 PTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQTKRGKQVCADPSESWVQEYVYDLE 90
Query: 108 EN 109
N
Sbjct: 91 LN 92
>gi|4506845 chemokine C-C motif ligand 4 isoform 1 precursor [Homo
sapiens]
Length = 92
Score = 85.1 bits (209), Expect = 1e-17
Identities = 33/62 (53%), Positives = 47/62 (75%)
Query: 48 PSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
P+ CCF+YT K+PR ++DYYET+S CS+P +VF TKR VC +PS+ WVQ+Y+ D++
Sbjct: 31 PTACCFSYTARKLPRNFVVDYYETSSLCSQPAVVFQTKRSKQVCADPSESWVQEYVYDLE 90
Query: 108 EN 109
N
Sbjct: 91 LN 92
>gi|22538808 small inducible cytokine A23 isoform CKbeta8 precursor
[Homo sapiens]
Length = 120
Score = 83.2 bits (204), Expect = 4e-17
Identities = 43/111 (38%), Positives = 70/111 (63%), Gaps = 5/111 (4%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLK--LVGGPYHPS--ECCFTYT 56
MK+SVAA+ +L+T ALG++ + + + K+ L+ ++ +H + +CC +YT
Sbjct: 1 MKVSVAALSCLMLVT-ALGSQARVTKDAETEFMMSKLPLENPVLLDRFHATSADCCISYT 59
Query: 57 TYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
IP + Y+ETNS+CSKPG++F+TK+G C NPSDK VQ ++ +K
Sbjct: 60 PRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQVQVCVRMLK 110
>gi|4506831 small inducible cytokine A18 precursor [Homo sapiens]
Length = 89
Score = 82.0 bits (201), Expect = 9e-17
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 51 CCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMKEN 109
CC YT+++IP++ I+DY ET+ QC KPG++ +TKRG +C +P+ KWVQ YI D+K N
Sbjct: 30 CCLVYTSWQIPQKFIVDYSETSPQCPKPGVILLTKRGRQICADPNKKWVQKYISDLKLN 88
>gi|14602449 chemokine (C-C motif) ligand 15 precursor [Homo
sapiens]
Length = 113
Score = 79.3 bits (194), Expect = 6e-16
Identities = 40/110 (36%), Positives = 69/110 (62%), Gaps = 4/110 (3%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLK--LVGGPYH-PSECCFTYTT 57
MK+SVAA+ +L+ + LG++ + + + + K+ L+ +V +H ++CC +Y +
Sbjct: 1 MKVSVAALSCLMLVAV-LGSQAQFINDAETELMMSKLPLENPVVLNSFHFAADCCTSYIS 59
Query: 58 YKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
IP + Y+ET+S+CSKPG++F+TK+G VC PS VQD +K +K
Sbjct: 60 QSIPCSLMKSYFETSSECSKPGVIFLTKKGRQVCAKPSGPGVQDCMKKLK 109
>gi|22538806 small inducible cytokine A23 isoform CKbeta8-1
precursor [Homo sapiens]
Length = 137
Score = 77.0 bits (188), Expect = 3e-15
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 22/128 (17%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLK-------------------- 40
MK+SVAA+ +L+T ALG++ + + + K+ L+
Sbjct: 1 MKVSVAALSCLMLVT-ALGSQARVTKDAETEFMMSKLPLENPVLLDMLWRRKIGPQMTLS 59
Query: 41 -LVGGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWV 99
G ++CC +YT IP + Y+ETNS+CSKPG++F+TK+G C NPSDK V
Sbjct: 60 HAAGFHATSADCCISYTPRSIPCSLLESYFETNSECSKPGVIFLTKKGRRFCANPSDKQV 119
Query: 100 QDYIKDMK 107
Q ++ +K
Sbjct: 120 QVCVRMLK 127
>gi|22538814 small inducible cytokine A5 precursor [Homo sapiens]
Length = 91
Score = 71.2 bits (173), Expect = 2e-13
Identities = 33/107 (30%), Positives = 51/107 (47%), Gaps = 18/107 (16%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKI 60
MK+S AA+ L+ T + S + P CCF Y +
Sbjct: 1 MKVSAAALAVILIATALCAPASASPYSSDTTP------------------CCFAYIARPL 42
Query: 61 PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
PR I +Y+ T+ +CS P +VF+T++ VC NP KWV++YI ++
Sbjct: 43 PRAHIKEYFYTSGKCSNPAVVFVTRKNRQVCANPEKKWVREYINSLE 89
>gi|4759074 small inducible cytokine A16 precursor [Homo sapiens]
Length = 120
Score = 70.1 bits (170), Expect = 4e-13
Identities = 40/105 (38%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
Query: 1 MKISVAAIPFFLLITIALGTKTESSSQTGGKPKVVKIQLKLVGGPYHPSECCFTYTTYKI 60
MK+S AA+ +LI I +S + +PKV + PS CC Y +
Sbjct: 1 MKVSEAALSLLVLILII-------TSASRSQPKVPE-------WVNTPSTCCLKYYEKVL 46
Query: 61 PRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKD 105
PR+ ++ Y + + C P I+F+TKR VCTNP+D WVQ+YIKD
Sbjct: 47 PRRLVVGYRKALN-CHLPAIIFVTKRNREVCTNPNDDWVQEYIKD 90
>gi|4885587 small inducible cytokine A13 precursor [Homo sapiens]
Length = 98
Score = 67.8 bits (164), Expect = 2e-12
Identities = 26/59 (44%), Positives = 40/59 (67%)
Query: 48 PSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 106
PS CCFT+++ KI QR+ Y T S+C + ++F TK G +C +P +KWVQ+Y+K +
Sbjct: 31 PSTCCFTFSSKKISLQRLKSYVITTSRCPQKAVIFRTKLGKEICADPKEKWVQNYMKHL 89
>gi|22538816 small inducible cytokine A8 precursor [Homo sapiens]
Length = 99
Score = 61.6 bits (148), Expect = 1e-10
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 48 PSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 106
P CCF KIP QR+ Y TN QC K ++F TKRG VC +P ++WV+D +K +
Sbjct: 31 PITCCFNVINRKIPIQRLESYTRITNIQCPKEAVIFKTKRGKEVCADPKERWVRDSMKHL 90
Query: 107 KE 108
+
Sbjct: 91 DQ 92
>gi|5174671 chemokine (C-C motif) ligand 26 precursor [Homo sapiens]
Length = 94
Score = 60.1 bits (144), Expect = 4e-10
Identities = 25/57 (43%), Positives = 35/57 (61%)
Query: 51 CCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
CCF Y+ +P + Y T++ CS+ ++F TKRG VCT+P KWVQ YI +K
Sbjct: 33 CCFQYSHKPLPWTWVRSYEFTSNSCSQRAVIFTTKRGKKVCTHPRKKWVQKYISLLK 89
>gi|22165427 small inducible cytokine A24 precursor [Homo sapiens]
Length = 119
Score = 59.7 bits (143), Expect = 5e-10
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 48 PSECCFTYTTYKIPRQRIMDYY-ETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 106
PS CC + + +IP R++ Y + S C K G++F TK+G C +P +WVQ Y+K++
Sbjct: 30 PSPCCMFFVSKRIPENRVVSYQLSSRSTCLKAGVIFTTKKGQQFCGDPKQEWVQRYMKNL 89
>gi|13435402 chemokine (C-C motif) ligand 7 precursor [Homo sapiens]
Length = 99
Score = 57.4 bits (137), Expect = 2e-09
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 51 CCFTYTTYKIPRQRIMDYYET-NSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDM 106
CC+ + KIP+QR+ Y T +S C + ++F TK +C +P+ KWVQD++K +
Sbjct: 34 CCYRFINKKIPKQRLESYRRTTSSHCPREAVIFKTKLDKEICADPTQKWVQDFMKHL 90
>gi|4506827 small inducible cytokine A11 precursor [Homo sapiens]
Length = 97
Score = 55.5 bits (132), Expect = 9e-09
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 41 LVGGPYHPSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWV 99
L G P+ CCF KIP QR+ Y T+ +C + ++F TK +C +P KWV
Sbjct: 22 LAGPASVPTTCCFNLANRKIPLQRLESYRRITSGKCPQKAVIFKTKLAKDICADPKKKWV 81
Query: 100 QDYIK 104
QD +K
Sbjct: 82 QDSMK 86
>gi|4506829 small inducible cytokine A17 precursor [Homo sapiens]
Length = 94
Score = 54.7 bits (130), Expect = 2e-08
Identities = 20/55 (36%), Positives = 38/55 (69%)
Query: 50 ECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIK 104
ECC Y IP +++ +Y+T+ CS+ IVF+T +G ++C++P++K V++ +K
Sbjct: 32 ECCLEYFKGAIPLRKLKTWYQTSEDCSRDAIVFVTVQGRAICSDPNNKRVKNAVK 86
>gi|22538804 small inducible cytokine A22 precursor [Homo sapiens]
Length = 93
Score = 52.0 bits (123), Expect = 1e-07
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Query: 44 GPY----HPSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWV 99
GPY S CC Y Y++P + + +Y T+ C +PG+V +T R +C +P WV
Sbjct: 25 GPYGANMEDSVCCRDYVRYRLPLRVVKHFYWTSDSCPRPGVVLLTFRDKEICADPRVPWV 84
Query: 100 QDYIKDMKE 108
+ + + +
Sbjct: 85 KMILNKLSQ 93
>gi|4506841 small inducible cytokine A2 precursor [Homo sapiens]
Length = 99
Score = 51.2 bits (121), Expect = 2e-07
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 48 PSECCFTYTTYKIPRQRIMDYYE-TNSQCSKPGIVFITKRGHSVCTNPSDKWVQD 101
P CC+ +T KI QR+ Y T+S+C K ++F T +C +P KWVQD
Sbjct: 31 PVTCCYNFTNRKISVQRLASYRRITSSKCPKEAVIFKTIVAKEICADPKQKWVQD 85
>gi|4506833 small inducible cytokine A1 precursor [Homo sapiens]
Length = 96
Score = 50.4 bits (119), Expect = 3e-07
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 49 SECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIKDMK 107
S CCF++ +IP + I+ Y T+S CS G++F KRG C + WVQ + K ++
Sbjct: 31 SRCCFSFAEQEIPLRAILCYRNTSSICSNEGLIFKLKRGKEACALDTVGWVQRHRKMLR 89
>gi|4506853 chemokine (C motif) ligand 1 [Homo sapiens]
Length = 114
Score = 49.3 bits (116), Expect = 7e-07
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 42 VGGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQD 101
VG C + TT ++P RI Y T ++ S ++FITKRG VC +P WV+D
Sbjct: 22 VGSEVSDKRTCVSLTTQRLPVSRIKTY--TITEGSLRAVIFITKRGLKVCADPQATWVRD 79
Query: 102 YIKDM 106
++ M
Sbjct: 80 VVRSM 84
>gi|4506855 chemokine (C motif) ligand 2 [Homo sapiens]
Length = 114
Score = 48.5 bits (114), Expect = 1e-06
Identities = 24/65 (36%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 42 VGGPYHPSECCFTYTTYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWVQD 101
VG C + TT ++P RI Y T ++ S ++FITKRG VC +P WV+D
Sbjct: 22 VGSEVSHRRTCVSLTTQRLPVSRIKTY--TITEGSLRAVIFITKRGLKVCADPQATWVRD 79
Query: 102 YIKDM 106
++ M
Sbjct: 80 VVRSM 84
>gi|5454040 small inducible cytokine A19 precursor [Homo sapiens]
Length = 98
Score = 40.0 bits (92), Expect = 4e-04
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Query: 42 VGGPYHPSECCFTYTTYKIPRQ--RIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDKWV 99
+ G +CC + T IP R Y C P +VF T RG +C P WV
Sbjct: 20 LSGTNDAEDCCLSVTQKPIPGYIVRNFHYLLIKDGCRVPAVVFTTLRGRQLCAPPDQPWV 79
Query: 100 QDYIKDMK 107
+ I+ ++
Sbjct: 80 ERIIQRLQ 87
>gi|4506857 chemokine (C-X3-C motif) ligand 1 [Homo sapiens]
Length = 397
Score = 39.7 bits (91), Expect = 5e-04
Identities = 19/69 (27%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Query: 41 LVGGPYHP-SECCFTYT--TYKIPRQRIMDYYETNSQCSKPGIVFITKRGHSVCTNPSDK 97
L+ G +H ++C T + T KIP ++ Y + + C K I+ T++ C +P ++
Sbjct: 21 LLAGQHHGVTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAIILETRQHRLFCADPKEQ 80
Query: 98 WVQDYIKDM 106
WV+D ++ +
Sbjct: 81 WVKDAMQHL 89
>gi|4506835 small inducible cytokine A21 precursor [Homo sapiens]
Length = 134
Score = 39.3 bits (90), Expect = 7e-04
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 50 ECCFTYTTYKIPRQRIMDY--YETNSQCSKPGIVFITKRGH--SVCTNPSDKWVQDYIKD 105
+CC Y+ KIP + + Y E + CS P I+F+ ++ +C +P + WVQ ++
Sbjct: 30 DCCLKYSQRKIPAKVVRSYRKQEPSLGCSIPAILFLPRKRSQAELCADPKELWVQQLMQH 89
Query: 106 M 106
+
Sbjct: 90 L 90
>gi|194239688 chemokine (C-C motif) ligand 20 isoform 2 [Homo
sapiens]
Length = 95
Score = 36.6 bits (83), Expect = 0.004
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 50 ECCFTYTTYKIPRQRIMDYYE--TNSQCSKPGIVFITKRGHSVCTNPSDKWVQDYIK 104
+CC YT + + I+ + N C I+F TK+ SVC NP WV+ ++
Sbjct: 30 DCCLGYTDRILHPKFIVGFTRQLANEGCDINAIIFHTKKKLSVCANPKQTWVKYIVR 86
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,537,737
Number of Sequences: 37866
Number of extensions: 192517
Number of successful extensions: 321
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 274
Number of HSP's gapped (non-prelim): 44
length of query: 109
length of database: 18,247,518
effective HSP length: 79
effective length of query: 30
effective length of database: 15,256,104
effective search space: 457683120
effective search space used: 457683120
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.