PCDHGC5 876

Name: PCDHGC5	Sequence: fasta or formatted (944aa)		NCBI GI: 11128023
Description: protocadherin gamma subfamily C, 5 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [878aa] protocadherin gamma subfamily C, 5 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.5 71 2 C cysteine 1.3 12 2 D aspartate 7.1 67 2 E glutamate 5.0 47 2 F phenylalanine 3.1 29 1 G glycine 7.5 71 4 H histidine 2.1 20 1 I isoleucine 3.0 28 2 K lysine 2.4 23 3 L leucine 11.4 108 3 M methionine 1.3 12 1 N asparagine 4.8 45 2 P proline 7.0 66 2 Q glutamine 5.1 48 2 R arginine 5.3 50 2 S serine 10.0 94 2 T threonine 6.4 60 2 V valine 7.0 66 3 W tryptophan 0.7 7 1 Y tyrosine 2.1 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily C, 5 isoform 1 precurs... PCDHGC5 0.864 protocadherin gamma subfamily C, 5 isoform 2 precurs... PCDHGC4 0.484 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHGA11 0.446 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA5 0.446 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA4 0.445 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA3 0.444 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGB1 0.441 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDHGA2 0.438 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA12 0.437 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA6 0.437 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA9 0.437 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA8 0.434 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGA7 0.433 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA10 0.432 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGB7 0.431 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGB4 0.427 protocadherin gamma subfamily B, 4 isoform 1 precurs... PCDHGB6 0.424 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB5 0.424 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGC3 0.423 protocadherin gamma subfamily C, 3 isoform 1 precurs... PCDHGB2 0.422 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGA1 0.422 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGB3 0.421 protocadherin gamma subfamily B, 3 isoform 1 precurs... PCDHAC2 0.357 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHGC4 0.351 protocadherin gamma subfamily C, 4 isoform 2 precurs... PCDHAC2 0.343 protocadherin alpha subfamily C, 2 isoform 2 precurs... PCDH10 0.328 protocadherin 10 isoform 1 precursor PCDH10 0.324 protocadherin 10 isoform 2 precursor PCDHA3 0.320 protocadherin alpha 3 isoform 1 precursor PCDHA8 0.316 protocadherin alpha 8 isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.