PCDHGB5 880

Name: PCDHGB5	Sequence: fasta or formatted (923aa)		NCBI GI: 11128031
Description: protocadherin gamma subfamily B, 5 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [818aa] protocadherin gamma subfamily B, 5 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 75 2 C cysteine 1.4 13 1 D aspartate 5.6 52 2 E glutamate 6.4 59 2 F phenylalanine 3.6 33 1 G glycine 7.6 70 3 H histidine 1.5 14 1 I isoleucine 3.8 35 2 K lysine 3.7 34 3 L leucine 11.1 102 2 M methionine 1.1 10 1 N asparagine 4.8 44 2 P proline 6.3 58 2 Q glutamine 5.1 47 2 R arginine 4.7 43 2 S serine 9.5 88 3 T threonine 5.4 50 2 V valine 7.2 66 2 W tryptophan 0.4 4 1 Y tyrosine 2.8 26 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin gamma subfamily B, 5 isoform 1 precurs... PCDHGB5 0.859 protocadherin gamma subfamily B, 5 isoform 2 precurs... PCDHGB4 0.854 protocadherin gamma subfamily B, 4 isoform 1 precurs... PCDHGB6 0.747 protocadherin gamma subfamily B, 6 isoform 1 precurs... PCDHGB1 0.722 protocadherin gamma subfamily B, 1 isoform 1 precurs... PCDHGB2 0.718 protocadherin gamma subfamily B, 2 isoform 1 precurs... PCDHGB4 0.716 protocadherin gamma subfamily B, 4 isoform 2 precurs... PCDHGB7 0.710 protocadherin gamma subfamily B, 7 isoform 1 precurs... PCDHGB3 0.699 protocadherin gamma subfamily B, 3 isoform 1 precurs... PCDHGB6 0.609 protocadherin gamma subfamily B, 6 isoform 2 precurs... PCDHGB1 0.585 protocadherin gamma subfamily B, 1 isoform 2 precurs... PCDHGB2 0.583 protocadherin gamma subfamily B, 2 isoform 2 precurs... PCDHGB7 0.574 protocadherin gamma subfamily B, 7 isoform 2 precurs... PCDHGB3 0.562 protocadherin gamma subfamily B, 3 isoform 2 precurs... PCDHGA5 0.507 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGA11 0.504 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA1 0.502 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA12 0.498 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGA9 0.498 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA6 0.496 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA3 0.490 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA4 0.485 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA2 0.483 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHGA10 0.483 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA8 0.480 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDHGA7 0.479 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGC4 0.444 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHGC5 0.438 protocadherin gamma subfamily C, 5 isoform 1 precurs... PCDHGC3 0.438 protocadherin gamma subfamily C, 3 isoform 1 precurs... PCDHGA5 0.375 protocadherin gamma subfamily A, 5 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.