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Search of human proteins with 14574568
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo
sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo sapi... 292 6e-80
gi|13899241 ionized calcium binding adapter molecule 2 isoform 1... 194 2e-50
gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo sapi... 185 1e-47
gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens] 109 9e-25
gi|20149675 EF-hand domain family, member D2 [Homo sapiens] 53 8e-08
gi|20149496 EF-hand domain family, member D1 [Homo sapiens] 51 4e-07
gi|58218968 calmodulin 3 [Homo sapiens] 49 2e-06
gi|4502549 calmodulin 2 [Homo sapiens] 49 2e-06
gi|5901912 calmodulin 1 [Homo sapiens] 49 2e-06
gi|4885111 calmodulin-like 3 [Homo sapiens] 45 3e-05
gi|4757974 centrin 1 [Homo sapiens] 44 4e-05
gi|4757902 caltractin [Homo sapiens] 43 1e-04
gi|4507617 fast skeletal muscle troponin C [Homo sapiens] 42 2e-04
gi|133908616 glycerol-3-phosphate dehydrogenase 2, mitochondrial... 41 4e-04
gi|133908614 glycerol-3-phosphate dehydrogenase 2, mitochondrial... 41 4e-04
gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 40 0.001
gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens] 39 0.001
gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens] 39 0.001
gi|11067753 calcium binding protein 5 [Homo sapiens] 39 0.001
gi|50897266 calmodulin-like 6 [Homo sapiens] 39 0.001
gi|4507615 troponin C, slow [Homo sapiens] 39 0.002
gi|38348382 spermatogenesis associated 21 [Homo sapiens] 39 0.002
gi|223278387 calmodulin-like 5 [Homo sapiens] 38 0.003
gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens] 34 0.038
gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens] 34 0.038
gi|118918407 spectrin repeat containing, nuclear envelope 2 isof... 33 0.066
gi|118918403 spectrin repeat containing, nuclear envelope 2 isof... 33 0.066
gi|38570109 CAP-binding protein complex interacting protein 1 is... 32 0.15
gi|38570107 CAP-binding protein complex interacting protein 1 is... 32 0.15
gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens] 31 0.42
>gi|14574568 allograft inflammatory factor 1 isoform 3 [Homo
sapiens]
Length = 147
Score = 292 bits (748), Expect = 6e-80
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLN 60
MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLN
Sbjct: 1 MSQTRDLQGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLN 60
Query: 61 GNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 120
GNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM
Sbjct: 61 GNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 120
Query: 121 ILMYEEKAREKEKPTGPPAKKAISELP 147
ILMYEEKAREKEKPTGPPAKKAISELP
Sbjct: 121 ILMYEEKAREKEKPTGPPAKKAISELP 147
>gi|13899241 ionized calcium binding adapter molecule 2 isoform 1
[Homo sapiens]
Length = 150
Score = 194 bits (494), Expect = 2e-50
Identities = 94/141 (66%), Positives = 115/141 (81%), Gaps = 1/141 (0%)
Query: 8 QGGKAFGLLKAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDI 67
QGGKAFGLLKA+QE RL EIN++FL D KYS +E+LP KL FKEKYMEFDLN G+ID+
Sbjct: 10 QGGKAFGLLKARQERRLAEINREFLCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDL 69
Query: 68 MSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEK 127
MSLKRM+EKLGVPKTHLE+KK+I EV+ G +T SY DF+ MMLGKRSA+LK+++M+E K
Sbjct: 70 MSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGKRSAVLKLVMMFEGK 129
Query: 128 AREKE-KPTGPPAKKAISELP 147
A E KP GPP ++ I+ LP
Sbjct: 130 ANESSPKPVGPPPERDIASLP 150
>gi|14574566 allograft inflammatory factor 1 isoform 1 [Homo
sapiens]
Length = 93
Score = 185 bits (470), Expect = 1e-47
Identities = 93/93 (100%), Positives = 93/93 (100%)
Query: 55 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 114
MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR
Sbjct: 1 MEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKR 60
Query: 115 SAILKMILMYEEKAREKEKPTGPPAKKAISELP 147
SAILKMILMYEEKAREKEKPTGPPAKKAISELP
Sbjct: 61 SAILKMILMYEEKAREKEKPTGPPAKKAISELP 93
>gi|4758612 allograft inflammatory factor 1 isoform 2 [Homo sapiens]
Length = 132
Score = 109 bits (272), Expect = 9e-25
Identities = 55/55 (100%), Positives = 55/55 (100%)
Query: 66 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 120
DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM
Sbjct: 78 DIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKM 132
Score = 27.7 bits (60), Expect = 3.6
Identities = 11/11 (100%), Positives = 11/11 (100%)
Query: 55 MEFDLNGNGDI 65
MEFDLNGNGDI
Sbjct: 1 MEFDLNGNGDI 11
>gi|20149675 EF-hand domain family, member D2 [Homo sapiens]
Length = 240
Score = 53.1 bits (126), Expect = 8e-08
Identities = 24/62 (38%), Positives = 39/62 (62%)
Query: 46 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 105
+++ ++ + ++D +G ID+M LK M+EKLG P+THL LK +I EV S+ +
Sbjct: 93 QIKDMEKMFKQYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFRE 152
Query: 106 FL 107
FL
Sbjct: 153 FL 154
>gi|20149496 EF-hand domain family, member D1 [Homo sapiens]
Length = 239
Score = 50.8 bits (120), Expect = 4e-07
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 47 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDF 106
++ + + +D +G ID+M LK M+EKLG P+THL LK +I EV S+ +F
Sbjct: 92 IKDLESMFKLYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKSMIKEVDEDFDGKLSFREF 151
Query: 107 LRMMLGKRSAILKMILMYEEKAREKEKPTGPPAKKAISEL 146
L ++ ++ A E ++ +G A +SE+
Sbjct: 152 L-------------LIFHKAAAGELQEDSGLMALAKLSEI 178
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 2e-06
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 39 SDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSG 98
+D+ ++ FKE + FD +G+G I L ++ LG T EL+ +I EV +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 99 ETFSYPDFLRMMLGK 113
T +P+FL MM K
Sbjct: 62 GTIDFPEFLTMMARK 76
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 2e-06
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 39 SDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSG 98
+D+ ++ FKE + FD +G+G I L ++ LG T EL+ +I EV +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 99 ETFSYPDFLRMMLGK 113
T +P+FL MM K
Sbjct: 62 GTIDFPEFLTMMARK 76
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 2e-06
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 39 SDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSG 98
+D+ ++ FKE + FD +G+G I L ++ LG T EL+ +I EV +
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 99 ETFSYPDFLRMMLGK 113
T +P+FL MM K
Sbjct: 62 GTIDFPEFLTMMARK 76
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 44.7 bits (104), Expect = 3e-05
Identities = 23/75 (30%), Positives = 38/75 (50%)
Query: 39 SDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSG 98
+D+ ++ FKE + FD +G+G I L ++ LG T EL+ ++ E+
Sbjct: 2 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 61
Query: 99 ETFSYPDFLRMMLGK 113
T +P+FL MM K
Sbjct: 62 GTVDFPEFLGMMARK 76
Score = 36.2 bits (82), Expect = 0.010
Identities = 16/66 (24%), Positives = 35/66 (53%)
Query: 48 EGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFL 107
E +E + FD +GNG + L+ ++ +LG + E+ ++I + +Y +F+
Sbjct: 84 EEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEFV 143
Query: 108 RMMLGK 113
R+++ K
Sbjct: 144 RVLVSK 149
>gi|4757974 centrin 1 [Homo sapiens]
Length = 172
Score = 44.3 bits (103), Expect = 4e-05
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 35 PKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVS 94
PK ED ++ +E + FD++G+G ID LK + LG E+KK+I EV
Sbjct: 21 PKPELTEDQKQEV---REAFDLFDVDGSGTIDAKELKVAMRALGFEPRKEEMKKMISEVD 77
Query: 95 SGSGETFSYPDFLRMMLGKRS------AILKMILMYEE 126
S+ DFL +M K S ILK ++++
Sbjct: 78 REGTGKISFNDFLAVMTQKMSEKDTKEEILKAFRLFDD 115
Score = 32.0 bits (71), Expect = 0.19
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 57 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 110
FD + G I +LKR+ +LG T EL+++I E + +FLR+M
Sbjct: 113 FDDDETGKISFKNLKRVANELGENLTDEELQEMIDEADRDGDGEVNEEEFLRIM 166
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 42.7 bits (99), Expect = 1e-04
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 51 KEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 110
+E + FD +G G ID+ LK + LG E+KK+I E+ ++ DFL +M
Sbjct: 34 REAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVM 93
Query: 111 LGKRS------AILKMILMYEE 126
K S ILK ++++
Sbjct: 94 TQKMSEKDTKEEILKAFKLFDD 115
Score = 33.5 bits (75), Expect = 0.066
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 57 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMM 110
FD + G I +LKR+ ++LG T EL+++I E S +FLR+M
Sbjct: 113 FDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM 166
>gi|4507617 fast skeletal muscle troponin C [Homo sapiens]
Length = 160
Score = 42.0 bits (97), Expect = 2e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 50 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 109
FK + FD +G GDI + L ++ LG T EL +I EV T + +FL M
Sbjct: 20 FKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVM 79
Query: 110 ML 111
M+
Sbjct: 80 MV 81
Score = 35.4 bits (80), Expect = 0.017
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 21 EERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVP 80
EE L + +Q +D K S+E+L E + FD N +G ID L + G
Sbjct: 74 EEFLVMMVRQMKEDAKGKSEEELA-------ECFRIFDRNADGYIDPEELAEIFRASGEH 126
Query: 81 KTHLELKKLIGEVSSGSGETFSYPDFLRMMLG 112
T E++ L+ + + + +FL+MM G
Sbjct: 127 VTDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 158
>gi|133908616 glycerol-3-phosphate dehydrogenase 2, mitochondrial
[Homo sapiens]
Length = 727
Score = 40.8 bits (94), Expect = 4e-04
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 43 LPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFS 102
LPS ++ +K+++ +FD + G I I+ ++R+LE + V L +++ EV
Sbjct: 621 LPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVE 680
Query: 103 YPDFLRMM 110
+FL++M
Sbjct: 681 LNEFLQLM 688
>gi|133908614 glycerol-3-phosphate dehydrogenase 2, mitochondrial
[Homo sapiens]
Length = 727
Score = 40.8 bits (94), Expect = 4e-04
Identities = 19/68 (27%), Positives = 38/68 (55%)
Query: 43 LPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFS 102
LPS ++ +K+++ +FD + G I I+ ++R+LE + V L +++ EV
Sbjct: 621 LPSDIDRYKKRFHKFDADQKGFITIVDVQRVLESINVQMDENTLHEILNEVDLNKNGQVE 680
Query: 103 YPDFLRMM 110
+FL++M
Sbjct: 681 LNEFLQLM 688
>gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens]
Length = 370
Score = 39.7 bits (91), Expect = 0.001
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 37 YSSDEDL-PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSS 95
+ D L P ++E +E + EFD + +G I+ L + +G T +EL +L +++
Sbjct: 216 FGQDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINM 275
Query: 96 GSGETFSYPDFLRMMLGKRSA-ILKMILMYEEKAREKEKPTGPPAKKAISEL 146
G + DF+ +M K A MI + E + +E T + + SEL
Sbjct: 276 NLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 327
Score = 38.1 bits (87), Expect = 0.003
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 51 KEKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 109
++ + EFD NG+G+I L+ + K LG H +++++I +V + +F+RM
Sbjct: 308 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 367
Query: 110 M 110
M
Sbjct: 368 M 368
>gi|13929434 calcium binding protein 1 isoform 2 [Homo sapiens]
Length = 167
Score = 39.3 bits (90), Expect = 0.001
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 44 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSY 103
P ++E +E + EFD + +G I+ L + +G T +EL +L +++ G +
Sbjct: 21 PEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDF 80
Query: 104 PDFLRMMLGKRSA-ILKMILMYEEKAREKEKPTGPPAKKAISEL 146
DF+ +M K A MI + E + +E T + + SEL
Sbjct: 81 DDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 124
Score = 38.1 bits (87), Expect = 0.003
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 51 KEKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 109
++ + EFD NG+G+I L+ + K LG H +++++I +V + +F+RM
Sbjct: 105 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 164
Query: 110 M 110
M
Sbjct: 165 M 165
>gi|13929432 calcium binding protein 1 isoform 1 [Homo sapiens]
Length = 227
Score = 39.3 bits (90), Expect = 0.001
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 1/104 (0%)
Query: 44 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSY 103
P ++E +E + EFD + +G I+ L + +G T +EL +L +++ G +
Sbjct: 81 PEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDF 140
Query: 104 PDFLRMMLGKRSA-ILKMILMYEEKAREKEKPTGPPAKKAISEL 146
DF+ +M K A MI + E + +E T + + SEL
Sbjct: 141 DDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSEL 184
Score = 38.1 bits (87), Expect = 0.003
Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 51 KEKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 109
++ + EFD NG+G+I L+ + K LG H +++++I +V + +F+RM
Sbjct: 165 RDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 224
Query: 110 M 110
M
Sbjct: 225 M 225
>gi|11067753 calcium binding protein 5 [Homo sapiens]
Length = 173
Score = 39.3 bits (90), Expect = 0.001
Identities = 17/65 (26%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 47 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPD 105
++ ++ + EFD NG+G+I ++ L++ +++ LG T E+ +++ E T + +
Sbjct: 107 VQEMRDAFKEFDTNGDGEITLVELQQAMQRLLGERLTPREISEVVREADVNGDGTVDFEE 166
Query: 106 FLRMM 110
F++MM
Sbjct: 167 FVKMM 171
Score = 38.5 bits (88), Expect = 0.002
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 46 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 105
++E +E ++EFD + +G I L ++ +G T +EL +L ++ G + D
Sbjct: 29 EIEELREAFLEFDKDRDGFISCKDLGNLMRTMGYMPTEMELIELGQQIRMNLGGRVDFDD 88
Query: 106 FLRMMLGKRSA-ILKMILMYEEKAREKEKPTGPPAKKAISEL 146
F+ +M K A MI + E + KE T + + EL
Sbjct: 89 FVELMTPKLLAETAGMIGVQEMRDAFKEFDTNGDGEITLVEL 130
>gi|50897266 calmodulin-like 6 [Homo sapiens]
Length = 181
Score = 39.3 bits (90), Expect = 0.001
Identities = 19/63 (30%), Positives = 32/63 (50%)
Query: 57 FDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSA 116
FD G G ID +LK +L G P +E ++++ E T Y +F+ MM G+
Sbjct: 119 FDKEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRTIDYEEFVAMMTGESFK 178
Query: 117 ILK 119
+++
Sbjct: 179 LIQ 181
Score = 33.9 bits (76), Expect = 0.050
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 46 KLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 105
+++ +K + FD GNG++ L+ ++ LG+ T EL + +V + F+
Sbjct: 34 QIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRDNKGFFNCDG 93
Query: 106 FLRMMLGKRSAILKMILMYEEKAREKE 132
FL +M +Y EKA+ +E
Sbjct: 94 FLALM-----------GVYHEKAQNQE 109
>gi|4507615 troponin C, slow [Homo sapiens]
Length = 161
Score = 38.9 bits (89), Expect = 0.002
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 33 DDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGE 92
DD K S+E+L + + FD N +G ID+ LK ML+ G T ++++L+ +
Sbjct: 87 DDSKGKSEEEL-------SDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKD 139
Query: 93 VSSGSGETFSYPDFLRMMLG 112
+ Y +FL M G
Sbjct: 140 GDKNNDGRIDYDEFLEFMKG 159
Score = 30.8 bits (68), Expect = 0.42
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 32 LDDPKYSSDEDLPSKLEG-FKEKYMEFDLNG-NGDIDIMSLKRMLEKLGVPKTHLELKKL 89
+DD ++ E L + + FK + F L +G I L +++ LG T EL+++
Sbjct: 1 MDDIYKAAVEQLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEM 60
Query: 90 IGEVSSGSGETFSYPDFLRMML 111
I EV T + +FL MM+
Sbjct: 61 IDEVDEDGSGTVDFDEFLVMMV 82
>gi|38348382 spermatogenesis associated 21 [Homo sapiens]
Length = 469
Score = 38.9 bits (89), Expect = 0.002
Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 7/121 (5%)
Query: 17 KAQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK 76
KA+QE + K + + K S+E L K E Y E NG G++D SLK +L
Sbjct: 194 KARQEPEEQSLQKLYQNREK--SEEQLTLKQEEAFRSYFEI-FNGPGEVDAQSLKNILLL 250
Query: 77 LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGKRSAILKMILMYEEKAREKEKPTG 136
+G T +++ + + DFL +M R + E+ A P
Sbjct: 251 MGFSVTLAQVEDALMSADVNGDGRVDFKDFLAVMTDTR----RFFCSVEQNALSDMAPHN 306
Query: 137 P 137
P
Sbjct: 307 P 307
>gi|223278387 calmodulin-like 5 [Homo sapiens]
Length = 146
Score = 38.1 bits (87), Expect = 0.003
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 44 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSY 103
P + +K+ + D +GNG I+ L L+ G + +L+KLI EV S S+
Sbjct: 7 PEEEAQYKKAFSAVDTDGNGTINAQELGAALKATGKNLSEAQLRKLISEVDSDGDGEISF 66
Query: 104 PDFL 107
+FL
Sbjct: 67 QEFL 70
Score = 37.4 bits (85), Expect = 0.005
Identities = 20/64 (31%), Positives = 31/64 (48%)
Query: 47 LEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDF 106
LE + + FD +G+G I + L+R + LG P EL +I E +Y +F
Sbjct: 80 LEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEF 139
Query: 107 LRMM 110
RM+
Sbjct: 140 ARML 143
>gi|110611180 calcium binding protein 2 isoform 2 [Homo sapiens]
Length = 163
Score = 34.3 bits (77), Expect = 0.038
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 44 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSY 103
P ++E + + EFD + +G I L + LG T +EL ++ ++S G +
Sbjct: 20 PEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQISGGK---VDF 76
Query: 104 PDFLRMMLGKRSA-ILKMILMYEEKAREKEKPTGPPAKKAISEL 146
DF+ +M K A MI + E + +E T + ++ EL
Sbjct: 77 EDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGEL 120
Score = 33.1 bits (74), Expect = 0.086
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 51 KEKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 109
++ + EFD NG+G I + L+ L+ LG + E+ +++ +V + +F+RM
Sbjct: 101 RDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRM 160
Query: 110 M 110
M
Sbjct: 161 M 161
>gi|110611178 calcium binding protein 2 isoform 1 [Homo sapiens]
Length = 220
Score = 34.3 bits (77), Expect = 0.038
Identities = 27/104 (25%), Positives = 48/104 (46%), Gaps = 4/104 (3%)
Query: 44 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSY 103
P ++E + + EFD + +G I L + LG T +EL ++ ++S G +
Sbjct: 77 PEEIEELQVAFQEFDRDRDGYIGCRELGACMRTLGYMPTEMELIEISQQISGGK---VDF 133
Query: 104 PDFLRMMLGKRSA-ILKMILMYEEKAREKEKPTGPPAKKAISEL 146
DF+ +M K A MI + E + +E T + ++ EL
Sbjct: 134 EDFVELMGPKLLAETADMIGVRELRDAFREFDTNGDGRISVGEL 177
Score = 33.1 bits (74), Expect = 0.086
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 51 KEKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRM 109
++ + EFD NG+G I + L+ L+ LG + E+ +++ +V + +F+RM
Sbjct: 158 RDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRM 217
Query: 110 M 110
M
Sbjct: 218 M 218
>gi|118918407 spectrin repeat containing, nuclear envelope 2 isoform
5 [Homo sapiens]
Length = 6907
Score = 33.5 bits (75), Expect = 0.066
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 20 QEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGV 79
Q+E+L ++ K +D + L S +E F E+ F +D++S+KR L++L
Sbjct: 309 QKEKLQKLLKDSENDTYFKKYNSLLSFMESFNEEKKSF-------LDVLSIKRDLDEL-- 359
Query: 80 PKTHLELKK 88
K HL+L++
Sbjct: 360 DKDHLQLRE 368
>gi|118918403 spectrin repeat containing, nuclear envelope 2 isoform
1 [Homo sapiens]
Length = 6885
Score = 33.5 bits (75), Expect = 0.066
Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Query: 20 QEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEKLGV 79
Q+E+L ++ K +D + L S +E F E+ F +D++S+KR L++L
Sbjct: 309 QKEKLQKLLKDSENDTYFKKYNSLLSFMESFNEEKKSF-------LDVLSIKRDLDEL-- 359
Query: 80 PKTHLELKK 88
K HL+L++
Sbjct: 360 DKDHLQLRE 368
>gi|38570109 CAP-binding protein complex interacting protein 1
isoform b [Homo sapiens]
Length = 1349
Score = 32.3 bits (72), Expect = 0.15
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 50 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDF 106
FK+++++F NG I++ K++LE G+P + L ++ E SY DF
Sbjct: 487 FKKRFLDFSKEPNGKINVHDFKKVLEDTGMPMDDDQYALLTTKIGF-EKEGMSYLDF 542
Score = 27.7 bits (60), Expect = 3.6
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 56 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR----MML 111
E D+ GDI+ ++EK + + E ++LI + S F+Y DF++ ++
Sbjct: 1182 EKDVARQGDINASDFLALVEKFNLDISKEECQQLIIKYDLKSNGKFAYCDFIQSCVLLLK 1241
Query: 112 GKRSAIL-KMILMYEEKARE 130
K S+++ +M + K +E
Sbjct: 1242 AKESSLMHRMKIQNAHKMKE 1261
>gi|38570107 CAP-binding protein complex interacting protein 1
isoform a [Homo sapiens]
Length = 1501
Score = 32.3 bits (72), Expect = 0.15
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 50 FKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDF 106
FK+++++F NG I++ K++LE G+P + L ++ E SY DF
Sbjct: 639 FKKRFLDFSKEPNGKINVHDFKKVLEDTGMPMDDDQYALLTTKIGF-EKEGMSYLDF 694
Score = 27.7 bits (60), Expect = 3.6
Identities = 20/80 (25%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 56 EFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLR----MML 111
E D+ GDI+ ++EK + + E ++LI + S F+Y DF++ ++
Sbjct: 1334 EKDVARQGDINASDFLALVEKFNLDISKEECQQLIIKYDLKSNGKFAYCDFIQSCVLLLK 1393
Query: 112 GKRSAIL-KMILMYEEKARE 130
K S+++ +M + K +E
Sbjct: 1394 AKESSLMHRMKIQNAHKMKE 1413
>gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]
Length = 4967
Score = 30.8 bits (68), Expect = 0.42
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 49 GFKEKYMEFDLNGNGDIDIMSLKRMLEKLGVPKT--HLELKKLIGEVSS 95
G +E Y F +N N DI + KR+ + L VP H+E+ ++ G + S
Sbjct: 1231 GLQEGYEPFAVNTNRDITMWLSKRLPQFLQVPSNHEHIEVTRIDGTIDS 1279
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.134 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,828,604
Number of Sequences: 37866
Number of extensions: 255554
Number of successful extensions: 793
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 711
Number of HSP's gapped (non-prelim): 107
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.