Guide to the Human Genome
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Name: AIF1L Sequence: fasta or formatted (150aa) NCBI GI: 13899241
Description:

ionized calcium binding adapter molecule 2 isoform 1

Referenced in:

Calmodulin and Calcium

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7          7           1
 C cysteine            0.7          1           1
 D aspartate           4.7          7           1
 E glutamate          11.3         17           2
 F phenylalanine       4.7          7           1
 G glycine             7.3         11           2
 H histidine           0.7          1           1
 I isoleucine          3.3          5           1
 K lysine             10.0         15           2
 L leucine            10.7         16           2
 M methionine          7.3         11           2
 N asparagine          4.7          7           2
 P proline             5.3          8           3
 Q glutamine           2.0          3           1
 R arginine            6.0          9           2
 S serine              7.3         11           2
 T threonine           2.7          4           1
 V valine              4.7          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.0          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ionized calcium binding adapter molecule 2 isoform 1... 
AIF1                  0.617   allograft inflammatory factor 1 isoform 3 
AIF1                  0.372   allograft inflammatory factor 1 isoform 1 
AIF1                  0.219   allograft inflammatory factor 1 isoform 2 
EFHD2                 0.124   EF-hand domain family, member D2 
EFHD1                 0.113   EF-hand domain family, member D1 
CETN1                 0.077   centrin 1 
CABP1                 0.066   calcium binding protein 1 isoform 1 
CETN2                 0.062   caltractin 
CABP2                 0.062   calcium binding protein 2 isoform 2 
CABP2                 0.062   calcium binding protein 2 isoform 1 
CABP1                 0.058   calcium binding protein 1 isoform 3 
CABP1                 0.058   calcium binding protein 1 isoform 2 
TNNC2                 0.058   fast skeletal muscle troponin C 
CABP5                 0.058   calcium binding protein 5 
CALML6                0.051   calmodulin-like 6 
CALM3                 0.044   calmodulin 3 
CALM2                 0.044   calmodulin 2 
GPD2                  0.044   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
GPD2                  0.044   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
CALM1                 0.044   calmodulin 1 
CALML5                0.040   calmodulin-like 5 
LOC643699             0.040   PREDICTED: similar to golgi autoantigen, golgin sub...
LOC728080             0.040   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.040   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.040   PREDICTED: similar to Golgin subfamily A member 8-l...
CABP4                 0.036   calcium binding protein 4 
LOC728080             0.036   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC728047             0.036   PREDICTED: similar to Golgin subfamily A member 8-l...
LOC727909             0.036   PREDICTED: similar to Golgin subfamily A member 8-l...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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