CAST 458

Name: CAST	Sequence: fasta or formatted (654aa)		NCBI GI: 109637771
Description: calpastatin isoform l		Referenced in: Protease Inhibitors
Other entries for this name: alt prot [791aa] calpastatin isoform a alt prot [756aa] calpastatin isoform e alt prot [750aa] calpastatin isoform f alt prot [772aa] calpastatin isoform g alt prot [769aa] calpastatin isoform h alt prot [708aa] calpastatin isoform i alt prot [667aa] calpastatin isoform j alt prot [673aa] calpastatin isoform k alt prot [686aa] calpastatin isoform b alt prot [430aa] calpastatin isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 59 3 C cysteine 1.1 7 1 D aspartate 10.1 66 2 E glutamate 11.9 78 3 F phenylalanine 0.8 5 1 G glycine 4.9 32 2 H histidine 0.5 3 1 I isoleucine 2.4 16 1 K lysine 13.6 89 3 L leucine 6.6 43 2 M methionine 1.4 9 1 N asparagine 1.4 9 1 P proline 9.6 63 2 Q glutamine 3.1 20 2 R arginine 2.8 18 1 S serine 9.9 65 3 T threonine 6.7 44 2 V valine 3.4 22 2 W tryptophan 0.0 0 0 Y tyrosine 0.9 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpastatin isoform l CAST 0.993 calpastatin isoform j CAST 0.993 calpastatin isoform f CAST 0.991 calpastatin isoform k CAST 0.991 calpastatin isoform e CAST 0.983 calpastatin isoform h CAST 0.983 calpastatin isoform b CAST 0.983 calpastatin isoform g CAST 0.974 calpastatin isoform i CAST 0.974 calpastatin isoform a CAST 0.595 calpastatin isoform c NEFH 0.052 neurofilament, heavy polypeptide 200kDa NEFM 0.033 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.033 neurofilament, medium polypeptide 150kDa isoform 2 ... PCLO 0.033 piccolo isoform 2 PCLO 0.033 piccolo isoform 1 TRDN 0.032 triadin PRG4 0.029 proteoglycan 4 isoform D PRG4 0.029 proteoglycan 4 isoform C PRG4 0.029 proteoglycan 4 isoform B PRG4 0.029 proteoglycan 4 isoform A NOLC1 0.029 nucleolar and coiled-body phosphoprotein 1 BDP1 0.029 transcription factor-like nuclear regulator AFF4 0.028 ALL1 fused gene from 5q31 EIF5B 0.026 eukaryotic translation initiation factor 5B AFF1 0.025 myeloid/lymphoid or mixed-lineage leukemia trithorax ... ACIN1 0.024 apoptotic chromatin condensation inducer 1 ATRX 0.024 transcriptional regulator ATRX isoform 2 ATRX 0.024 transcriptional regulator ATRX isoform 1 TCOF1 0.024 Treacher Collins-Franceschetti syndrome 1 isoform e... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.