CAST 452

Name: CAST	Sequence: fasta or formatted (750aa)		NCBI GI: 109637759
Description: calpastatin isoform f		Referenced in: Protease Inhibitors
Other entries for this name: alt prot [791aa] calpastatin isoform a alt prot [756aa] calpastatin isoform e alt prot [772aa] calpastatin isoform g alt prot [769aa] calpastatin isoform h alt prot [708aa] calpastatin isoform i alt prot [667aa] calpastatin isoform j alt prot [673aa] calpastatin isoform k alt prot [654aa] calpastatin isoform l alt prot [686aa] calpastatin isoform b alt prot [430aa] calpastatin isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.7 73 4 C cysteine 0.9 7 1 D aspartate 9.1 68 2 E glutamate 11.2 84 3 F phenylalanine 0.7 5 1 G glycine 5.5 41 2 H histidine 0.7 5 1 I isoleucine 2.3 17 1 K lysine 13.3 100 3 L leucine 5.9 44 2 M methionine 1.3 10 1 N asparagine 1.2 9 1 P proline 9.5 71 2 Q glutamine 3.1 23 2 R arginine 3.2 24 2 S serine 11.6 87 3 T threonine 6.8 51 2 V valine 3.2 24 2 W tryptophan 0.0 0 0 Y tyrosine 0.9 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpastatin isoform f CAST 0.992 calpastatin isoform h CAST 0.992 calpastatin isoform g CAST 0.983 calpastatin isoform a CAST 0.968 calpastatin isoform e CAST 0.892 calpastatin isoform j CAST 0.884 calpastatin isoform b CAST 0.875 calpastatin isoform i CAST 0.868 calpastatin isoform l CAST 0.860 calpastatin isoform k CAST 0.520 calpastatin isoform c NEFH 0.045 neurofilament, heavy polypeptide 200kDa AFF4 0.030 ALL1 fused gene from 5q31 DSPP 0.029 dentin sialophosphoprotein preproprotein NEFM 0.029 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.029 neurofilament, medium polypeptide 150kDa isoform 2 ... TRDN 0.028 triadin PRG4 0.028 proteoglycan 4 isoform D PRG4 0.028 proteoglycan 4 isoform C PRG4 0.028 proteoglycan 4 isoform B PRG4 0.028 proteoglycan 4 isoform A PCLO 0.028 piccolo isoform 2 PCLO 0.028 piccolo isoform 1 TGOLN2 0.025 trans-golgi network protein 2 NOLC1 0.025 nucleolar and coiled-body phosphoprotein 1 ATRX 0.025 transcriptional regulator ATRX isoform 2 ATRX 0.025 transcriptional regulator ATRX isoform 1 EIF5B 0.025 eukaryotic translation initiation factor 5B BDP1 0.025 transcription factor-like nuclear regulator TCOF1 0.025 Treacher Collins-Franceschetti syndrome 1 isoform e... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.