CAST 456

Name: CAST	Sequence: fasta or formatted (667aa)		NCBI GI: 109637767
Description: calpastatin isoform j		Referenced in: Protease Inhibitors
Other entries for this name: alt prot [791aa] calpastatin isoform a alt prot [756aa] calpastatin isoform e alt prot [750aa] calpastatin isoform f alt prot [772aa] calpastatin isoform g alt prot [769aa] calpastatin isoform h alt prot [708aa] calpastatin isoform i alt prot [673aa] calpastatin isoform k alt prot [654aa] calpastatin isoform l alt prot [686aa] calpastatin isoform b alt prot [430aa] calpastatin isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 60 3 C cysteine 1.0 7 1 D aspartate 10.0 67 2 E glutamate 11.8 79 3 F phenylalanine 0.7 5 1 G glycine 5.1 34 2 H histidine 0.4 3 1 I isoleucine 2.5 17 1 K lysine 13.6 91 3 L leucine 6.4 43 2 M methionine 1.3 9 1 N asparagine 1.3 9 1 P proline 9.7 65 2 Q glutamine 3.0 20 2 R arginine 2.7 18 1 S serine 10.0 67 3 T threonine 6.7 45 2 V valine 3.3 22 2 W tryptophan 0.0 0 0 Y tyrosine 0.9 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpastatin isoform j CAST 1.000 calpastatin isoform f CAST 0.992 calpastatin isoform h CAST 0.992 calpastatin isoform b CAST 0.991 calpastatin isoform g CAST 0.981 calpastatin isoform i CAST 0.981 calpastatin isoform a CAST 0.973 calpastatin isoform l CAST 0.964 calpastatin isoform k CAST 0.964 calpastatin isoform e CAST 0.583 calpastatin isoform c NEFH 0.051 neurofilament, heavy polypeptide 200kDa NEFM 0.032 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.032 neurofilament, medium polypeptide 150kDa isoform 2 ... PCLO 0.030 piccolo isoform 2 PCLO 0.030 piccolo isoform 1 TRDN 0.029 triadin PRG4 0.028 proteoglycan 4 isoform D PRG4 0.028 proteoglycan 4 isoform C PRG4 0.028 proteoglycan 4 isoform B PRG4 0.028 proteoglycan 4 isoform A AFF4 0.028 ALL1 fused gene from 5q31 BDP1 0.027 transcription factor-like nuclear regulator NOLC1 0.026 nucleolar and coiled-body phosphoprotein 1 EIF5B 0.025 eukaryotic translation initiation factor 5B AFF1 0.025 myeloid/lymphoid or mixed-lineage leukemia trithorax ... CEP164 0.023 centrosomal protein 164kDa ACIN1 0.023 apoptotic chromatin condensation inducer 1 DSPP 0.023 dentin sialophosphoprotein preproprotein TCOF1 0.022 Treacher Collins-Franceschetti syndrome 1 isoform e... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.