CAST 24524

Name: CAST	Sequence: fasta or formatted (686aa)		NCBI GI: 27765085
Description: calpastatin isoform b		Referenced in: Protease Inhibitors
Other entries for this name: alt prot [791aa] calpastatin isoform a alt prot [756aa] calpastatin isoform e alt prot [750aa] calpastatin isoform f alt prot [772aa] calpastatin isoform g alt prot [769aa] calpastatin isoform h alt prot [708aa] calpastatin isoform i alt prot [667aa] calpastatin isoform j alt prot [673aa] calpastatin isoform k alt prot [654aa] calpastatin isoform l alt prot [430aa] calpastatin isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 60 3 C cysteine 1.0 7 1 D aspartate 9.8 67 2 E glutamate 12.1 83 3 F phenylalanine 0.7 5 1 G glycine 5.1 35 2 H histidine 0.7 5 1 I isoleucine 2.5 17 1 K lysine 13.8 95 3 L leucine 6.4 44 2 M methionine 1.3 9 1 N asparagine 1.3 9 1 P proline 9.6 66 2 Q glutamine 3.1 21 2 R arginine 2.6 18 1 S serine 10.1 69 3 T threonine 6.7 46 2 V valine 3.5 24 2 W tryptophan 0.0 0 0 Y tyrosine 0.9 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpastatin isoform b CAST 1.000 calpastatin isoform h CAST 0.990 calpastatin isoform i CAST 0.990 calpastatin isoform a CAST 0.973 calpastatin isoform k CAST 0.973 calpastatin isoform e CAST 0.963 calpastatin isoform j CAST 0.963 calpastatin isoform f CAST 0.955 calpastatin isoform g CAST 0.936 calpastatin isoform l CAST 0.566 calpastatin isoform c NEFH 0.049 neurofilament, heavy polypeptide 200kDa NEFM 0.031 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.031 neurofilament, medium polypeptide 150kDa isoform 2 ... PCLO 0.030 piccolo isoform 2 PCLO 0.030 piccolo isoform 1 TRDN 0.029 triadin AKAP12 0.027 A kinase (PRKA) anchor protein 12 isoform 1 AKAP12 0.027 A kinase (PRKA) anchor protein 12 isoform 2 AFF4 0.027 ALL1 fused gene from 5q31 BDP1 0.026 transcription factor-like nuclear regulator EIF5B 0.025 eukaryotic translation initiation factor 5B PRG4 0.025 proteoglycan 4 isoform D PRG4 0.025 proteoglycan 4 isoform C PRG4 0.025 proteoglycan 4 isoform B PRG4 0.025 proteoglycan 4 isoform A MAP1B 0.025 microtubule-associated protein 1B NOLC1 0.024 nucleolar and coiled-body phosphoprotein 1 TAF3 0.024 RNA polymerase II transcription factor TAFII140 [Ho... ATRX 0.023 transcriptional regulator ATRX isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.