CAST 450

Name: CAST	Sequence: fasta or formatted (791aa)		NCBI GI: 109637753
Description: calpastatin isoform a		Referenced in: Protease Inhibitors
Other entries for this name: alt prot [756aa] calpastatin isoform e alt prot [750aa] calpastatin isoform f alt prot [772aa] calpastatin isoform g alt prot [769aa] calpastatin isoform h alt prot [708aa] calpastatin isoform i alt prot [667aa] calpastatin isoform j alt prot [673aa] calpastatin isoform k alt prot [654aa] calpastatin isoform l alt prot [686aa] calpastatin isoform b alt prot [430aa] calpastatin isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.4 74 4 C cysteine 0.9 7 1 D aspartate 8.6 68 2 E glutamate 11.3 89 3 F phenylalanine 0.6 5 1 G glycine 5.4 43 2 H histidine 1.1 9 1 I isoleucine 2.3 18 1 K lysine 13.8 109 3 L leucine 5.8 46 2 M methionine 1.4 11 1 N asparagine 1.3 10 1 P proline 9.5 75 2 Q glutamine 3.4 27 2 R arginine 3.0 24 2 S serine 11.4 90 3 T threonine 6.6 52 2 V valine 3.4 27 2 W tryptophan 0.0 0 0 Y tyrosine 0.9 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpastatin isoform a CAST 0.968 calpastatin isoform g CAST 0.962 calpastatin isoform h CAST 0.939 calpastatin isoform e CAST 0.930 calpastatin isoform f CAST 0.898 calpastatin isoform i CAST 0.860 calpastatin isoform b CAST 0.837 calpastatin isoform k CAST 0.828 calpastatin isoform j CAST 0.805 calpastatin isoform l CAST 0.492 calpastatin isoform c NEFH 0.044 neurofilament, heavy polypeptide 200kDa AFF4 0.031 ALL1 fused gene from 5q31 TRDN 0.030 triadin AKAP12 0.029 A kinase (PRKA) anchor protein 12 isoform 1 AKAP12 0.029 A kinase (PRKA) anchor protein 12 isoform 2 PCLO 0.028 piccolo isoform 2 PCLO 0.028 piccolo isoform 1 DSPP 0.027 dentin sialophosphoprotein preproprotein NEFM 0.027 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.027 neurofilament, medium polypeptide 150kDa isoform 2 ... NOLC1 0.025 nucleolar and coiled-body phosphoprotein 1 AFF1 0.025 myeloid/lymphoid or mixed-lineage leukemia trithorax ... PRG4 0.025 proteoglycan 4 isoform D PRG4 0.025 proteoglycan 4 isoform C PRG4 0.025 proteoglycan 4 isoform B PRG4 0.025 proteoglycan 4 isoform A TCOF1 0.025 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.025 Treacher Collins-Franceschetti syndrome 1 isoform a ... EIF5B 0.025 eukaryotic translation initiation factor 5B Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.