CAST 24525

Name: CAST	Sequence: fasta or formatted (430aa)		NCBI GI: 27765087
Description: calpastatin isoform c		Referenced in: Protease Inhibitors
Other entries for this name: alt prot [791aa] calpastatin isoform a alt prot [756aa] calpastatin isoform e alt prot [750aa] calpastatin isoform f alt prot [772aa] calpastatin isoform g alt prot [769aa] calpastatin isoform h alt prot [708aa] calpastatin isoform i alt prot [667aa] calpastatin isoform j alt prot [673aa] calpastatin isoform k alt prot [654aa] calpastatin isoform l alt prot [686aa] calpastatin isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.8 38 3 C cysteine 1.6 7 1 D aspartate 11.9 51 2 E glutamate 11.9 51 2 F phenylalanine 1.6 7 1 G glycine 4.4 19 2 H histidine 0.7 3 1 I isoleucine 1.9 8 1 K lysine 13.3 57 2 L leucine 7.2 31 2 M methionine 1.2 5 1 N asparagine 1.2 5 1 P proline 9.5 41 2 Q glutamine 3.0 13 1 R arginine 3.5 15 2 S serine 9.1 39 3 T threonine 5.3 23 2 V valine 3.0 13 2 W tryptophan 0.2 1 1 Y tyrosine 0.7 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 calpastatin isoform c CAST 0.900 calpastatin isoform l CAST 0.900 calpastatin isoform k CAST 0.900 calpastatin isoform j CAST 0.900 calpastatin isoform i CAST 0.900 calpastatin isoform h CAST 0.900 calpastatin isoform g CAST 0.900 calpastatin isoform f CAST 0.900 calpastatin isoform e CAST 0.900 calpastatin isoform b CAST 0.900 calpastatin isoform a NEFH 0.061 neurofilament, heavy polypeptide 200kDa AFF1 0.038 myeloid/lymphoid or mixed-lineage leukemia trithorax ... NEFM 0.038 neurofilament, medium polypeptide 150kDa isoform 1 ... NEFM 0.038 neurofilament, medium polypeptide 150kDa isoform 2 ... PCLO 0.037 piccolo isoform 2 PCLO 0.037 piccolo isoform 1 IWS1 0.036 IWS1 homolog AFF4 0.036 ALL1 fused gene from 5q31 NOLC1 0.035 nucleolar and coiled-body phosphoprotein 1 TTN 0.033 titin isoform N2-A EIF5B 0.031 eukaryotic translation initiation factor 5B ACRC 0.029 ACRC protein ACIN1 0.029 apoptotic chromatin condensation inducer 1 MLL2 0.029 myeloid/lymphoid or mixed-lineage leukemia 2 TRDN 0.029 triadin MAP1B 0.027 microtubule-associated protein 1B AP3D1 0.026 adaptor-related protein complex 3, delta 1 subunit ... CCAR1 0.026 cell-cycle and apoptosis regulatory protein 1 ANKRD11 0.026 ankyrin repeat domain 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.