PCDHA5 3826

Name: PCDHA5	Sequence: fasta or formatted (816aa)		NCBI GI: 14165416
Description: protocadherin alpha 5 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [936aa] protocadherin alpha 5 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 65 2 C cysteine 1.3 11 1 D aspartate 5.8 47 2 E glutamate 6.6 54 3 F phenylalanine 3.4 28 2 G glycine 5.8 47 2 H histidine 1.8 15 1 I isoleucine 4.2 34 2 K lysine 3.4 28 1 L leucine 12.3 100 4 M methionine 0.9 7 1 N asparagine 4.8 39 2 P proline 5.8 47 2 Q glutamine 3.1 25 2 R arginine 5.6 46 3 S serine 9.1 74 2 T threonine 4.7 38 2 V valine 10.0 82 3 W tryptophan 0.6 5 1 Y tyrosine 2.9 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 5 isoform 2 precursor PCDHA5 0.959 protocadherin alpha 5 isoform 1 precursor PCDHA4 0.763 protocadherin alpha 4 isoform 2 precursor PCDHA4 0.763 protocadherin alpha 4 isoform 1 precursor PCDHA8 0.762 protocadherin alpha 8 isoform 2 precursor PCDHA8 0.762 protocadherin alpha 8 isoform 1 precursor PCDHA1 0.760 protocadherin alpha 1 isoform 2 precursor PCDHA1 0.760 protocadherin alpha 1 isoform 1 precursor PCDHA6 0.754 protocadherin alpha 6 isoform 2 precursor PCDHA6 0.754 protocadherin alpha 6 isoform 1 precursor PCDHA3 0.752 protocadherin alpha 3 isoform 1 precursor PCDHA3 0.752 protocadherin alpha 3 isoform 2 precursor PCDHA13 0.750 protocadherin alpha 13 isoform 2 precursor PCDHA13 0.750 protocadherin alpha 13 isoform 1 precursor PCDHA7 0.746 protocadherin alpha 7 isoform 2 precursor PCDHA7 0.744 protocadherin alpha 7 isoform 1 precursor PCDHA2 0.742 protocadherin alpha 2 isoform 2 precursor PCDHA2 0.742 protocadherin alpha 2 isoform 1 precursor PCDHA11 0.734 protocadherin alpha 11 isoform 2 precursor PCDHA11 0.734 protocadherin alpha 11 isoform 1 precursor PCDHA9 0.731 protocadherin alpha 9 isoform 2 precursor PCDHA9 0.731 protocadherin alpha 9 isoform 1 precursor PCDHA10 0.729 protocadherin alpha 10 isoform 2 precursor PCDHA10 0.729 protocadherin alpha 10 isoform 1 precursor PCDHA12 0.717 protocadherin alpha 12 isoform 2 precursor PCDHA12 0.717 protocadherin alpha 12 isoform 1 precursor PCDHA1 0.501 protocadherin alpha 1 isoform 3 precursor PCDHA6 0.484 protocadherin alpha 6 isoform 3 precursor PCDHA10 0.482 protocadherin alpha 10 isoform 3 precursor PCDH10 0.373 protocadherin 10 isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.