PCDHA9 3829

Name: PCDHA9	Sequence: fasta or formatted (950aa)		NCBI GI: 14165425
Description: protocadherin alpha 9 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [842aa] protocadherin alpha 9 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 72 1 C cysteine 1.2 11 1 D aspartate 6.2 59 1 E glutamate 6.7 64 2 F phenylalanine 2.7 26 2 G glycine 7.4 70 2 H histidine 1.8 17 1 I isoleucine 3.8 36 2 K lysine 4.4 42 8 L leucine 10.8 103 3 M methionine 0.9 9 1 N asparagine 3.9 37 2 P proline 6.8 65 2 Q glutamine 3.6 34 2 R arginine 4.5 43 2 S serine 9.4 89 3 T threonine 5.8 55 2 V valine 9.4 89 3 W tryptophan 0.7 7 1 Y tyrosine 2.3 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 9 isoform 1 precursor PCDHA7 0.885 protocadherin alpha 7 isoform 1 precursor PCDHA4 0.835 protocadherin alpha 4 isoform 1 precursor PCDHA9 0.830 protocadherin alpha 9 isoform 2 precursor PCDHA3 0.823 protocadherin alpha 3 isoform 1 precursor PCDHA1 0.803 protocadherin alpha 1 isoform 1 precursor PCDHA13 0.803 protocadherin alpha 13 isoform 1 precursor PCDHA6 0.799 protocadherin alpha 6 isoform 1 precursor PCDHA8 0.795 protocadherin alpha 8 isoform 1 precursor PCDHA10 0.792 protocadherin alpha 10 isoform 1 precursor PCDHA2 0.787 protocadherin alpha 2 isoform 1 precursor PCDHA5 0.787 protocadherin alpha 5 isoform 1 precursor PCDHA11 0.780 protocadherin alpha 11 isoform 1 precursor PCDHA12 0.772 protocadherin alpha 12 isoform 1 precursor PCDHA7 0.719 protocadherin alpha 7 isoform 2 precursor PCDHA4 0.666 protocadherin alpha 4 isoform 2 precursor PCDHA3 0.654 protocadherin alpha 3 isoform 2 precursor PCDHA13 0.634 protocadherin alpha 13 isoform 2 precursor PCDHA1 0.634 protocadherin alpha 1 isoform 2 precursor PCDHA6 0.630 protocadherin alpha 6 isoform 2 precursor PCDHA8 0.625 protocadherin alpha 8 isoform 2 precursor PCDHA10 0.623 protocadherin alpha 10 isoform 2 precursor PCDHA5 0.622 protocadherin alpha 5 isoform 2 precursor PCDHA2 0.618 protocadherin alpha 2 isoform 2 precursor PCDHA11 0.611 protocadherin alpha 11 isoform 2 precursor PCDHA12 0.607 protocadherin alpha 12 isoform 2 precursor PCDHAC2 0.450 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHA10 0.414 protocadherin alpha 10 isoform 3 precursor PCDHA1 0.413 protocadherin alpha 1 isoform 3 precursor PCDHA6 0.408 protocadherin alpha 6 isoform 3 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.