PCDHA6 3817

Name: PCDHA6	Sequence: fasta or formatted (803aa)		NCBI GI: 14165390
Description: protocadherin alpha 6 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [686aa] protocadherin alpha 6 isoform 3 precursor alt prot [950aa] protocadherin alpha 6 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.3 75 2 C cysteine 1.5 12 1 D aspartate 6.7 54 2 E glutamate 6.8 55 2 F phenylalanine 3.2 26 1 G glycine 6.2 50 2 H histidine 1.9 15 1 I isoleucine 3.7 30 2 K lysine 3.0 24 2 L leucine 12.0 96 4 M methionine 1.1 9 2 N asparagine 4.6 37 2 P proline 5.6 45 2 Q glutamine 3.1 25 2 R arginine 5.0 40 2 S serine 9.0 72 3 T threonine 4.4 35 2 V valine 9.8 79 2 W tryptophan 0.5 4 1 Y tyrosine 2.5 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 6 isoform 2 precursor PCDHA6 0.994 protocadherin alpha 6 isoform 1 precursor PCDHA8 0.879 protocadherin alpha 8 isoform 2 precursor PCDHA8 0.875 protocadherin alpha 8 isoform 1 precursor PCDHA3 0.792 protocadherin alpha 3 isoform 2 precursor PCDHA3 0.788 protocadherin alpha 3 isoform 1 precursor PCDHA13 0.769 protocadherin alpha 13 isoform 2 precursor PCDHA13 0.768 protocadherin alpha 13 isoform 1 precursor PCDHA5 0.767 protocadherin alpha 5 isoform 1 precursor PCDHA5 0.767 protocadherin alpha 5 isoform 2 precursor PCDHA4 0.766 protocadherin alpha 4 isoform 2 precursor PCDHA4 0.764 protocadherin alpha 4 isoform 1 precursor PCDHA10 0.763 protocadherin alpha 10 isoform 2 precursor PCDHA10 0.762 protocadherin alpha 10 isoform 1 precursor PCDHA1 0.762 protocadherin alpha 1 isoform 2 precursor PCDHA1 0.761 protocadherin alpha 1 isoform 1 precursor PCDHA7 0.758 protocadherin alpha 7 isoform 2 precursor PCDHA7 0.758 protocadherin alpha 7 isoform 1 precursor PCDHA11 0.757 protocadherin alpha 11 isoform 2 precursor PCDHA2 0.757 protocadherin alpha 2 isoform 2 precursor PCDHA2 0.756 protocadherin alpha 2 isoform 1 precursor PCDHA11 0.756 protocadherin alpha 11 isoform 1 precursor PCDHA9 0.754 protocadherin alpha 9 isoform 2 precursor PCDHA9 0.753 protocadherin alpha 9 isoform 1 precursor PCDHA12 0.746 protocadherin alpha 12 isoform 2 precursor PCDHA12 0.746 protocadherin alpha 12 isoform 1 precursor PCDHA6 0.661 protocadherin alpha 6 isoform 3 precursor PCDHA10 0.497 protocadherin alpha 10 isoform 3 precursor PCDHA1 0.487 protocadherin alpha 1 isoform 3 precursor PCDHGC3 0.372 protocadherin gamma subfamily C, 3 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.