PCDHA11 3816

Name: PCDHA11	Sequence: fasta or formatted (810aa)		NCBI GI: 14165387
Description: protocadherin alpha 11 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [949aa] protocadherin alpha 11 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 68 2 C cysteine 1.2 10 1 D aspartate 5.6 45 1 E glutamate 7.4 60 3 F phenylalanine 2.8 23 1 G glycine 6.4 52 2 H histidine 1.9 15 1 I isoleucine 2.8 23 2 K lysine 4.0 32 2 L leucine 12.3 100 4 M methionine 0.7 6 1 N asparagine 4.7 38 2 P proline 5.4 44 2 Q glutamine 3.8 31 2 R arginine 5.2 42 2 S serine 8.5 69 2 T threonine 5.3 43 2 V valine 9.9 80 2 W tryptophan 1.1 9 2 Y tyrosine 2.5 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 11 isoform 2 precursor PCDHA11 0.983 protocadherin alpha 11 isoform 1 precursor PCDHA13 0.754 protocadherin alpha 13 isoform 2 precursor PCDHA13 0.754 protocadherin alpha 13 isoform 1 precursor PCDHA8 0.753 protocadherin alpha 8 isoform 2 precursor PCDHA8 0.752 protocadherin alpha 8 isoform 1 precursor PCDHA4 0.749 protocadherin alpha 4 isoform 1 precursor PCDHA4 0.748 protocadherin alpha 4 isoform 2 precursor PCDHA6 0.747 protocadherin alpha 6 isoform 2 precursor PCDHA6 0.747 protocadherin alpha 6 isoform 1 precursor PCDHA1 0.746 protocadherin alpha 1 isoform 2 precursor PCDHA1 0.744 protocadherin alpha 1 isoform 1 precursor PCDHA12 0.744 protocadherin alpha 12 isoform 2 precursor PCDHA12 0.744 protocadherin alpha 12 isoform 1 precursor PCDHA2 0.743 protocadherin alpha 2 isoform 2 precursor PCDHA10 0.740 protocadherin alpha 10 isoform 2 precursor PCDHA2 0.740 protocadherin alpha 2 isoform 1 precursor PCDHA10 0.739 protocadherin alpha 10 isoform 1 precursor PCDHA3 0.737 protocadherin alpha 3 isoform 2 precursor PCDHA7 0.737 protocadherin alpha 7 isoform 1 precursor PCDHA3 0.737 protocadherin alpha 3 isoform 1 precursor PCDHA5 0.737 protocadherin alpha 5 isoform 1 precursor PCDHA7 0.736 protocadherin alpha 7 isoform 2 precursor PCDHA5 0.736 protocadherin alpha 5 isoform 2 precursor PCDHA9 0.722 protocadherin alpha 9 isoform 2 precursor PCDHA9 0.720 protocadherin alpha 9 isoform 1 precursor PCDHA10 0.487 protocadherin alpha 10 isoform 3 precursor PCDHA6 0.487 protocadherin alpha 6 isoform 3 precursor PCDHA1 0.485 protocadherin alpha 1 isoform 3 precursor PCDH10 0.356 protocadherin 10 isoform 1 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.