PCDHA11 37313

Name: PCDHA11	Sequence: fasta or formatted (949aa)		NCBI GI: 9256576
Description: protocadherin alpha 11 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [810aa] protocadherin alpha 11 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.0 76 2 C cysteine 0.9 9 1 D aspartate 5.5 52 1 E glutamate 7.5 71 3 F phenylalanine 2.7 26 1 G glycine 7.2 68 2 H histidine 1.8 17 1 I isoleucine 3.1 29 2 K lysine 5.2 49 8 L leucine 10.9 103 4 M methionine 0.6 6 1 N asparagine 4.8 46 2 P proline 6.2 59 2 Q glutamine 4.0 38 2 R arginine 4.8 46 2 S serine 8.9 84 2 T threonine 5.5 52 2 V valine 8.9 84 2 W tryptophan 1.3 12 2 Y tyrosine 2.3 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 11 isoform 1 precursor PCDHA11 0.831 protocadherin alpha 11 isoform 2 precursor PCDHA13 0.804 protocadherin alpha 13 isoform 1 precursor PCDHA8 0.804 protocadherin alpha 8 isoform 1 precursor PCDHA6 0.798 protocadherin alpha 6 isoform 1 precursor PCDHA1 0.798 protocadherin alpha 1 isoform 1 precursor PCDHA4 0.798 protocadherin alpha 4 isoform 1 precursor PCDHA12 0.796 protocadherin alpha 12 isoform 1 precursor PCDHA2 0.795 protocadherin alpha 2 isoform 1 precursor PCDHA10 0.794 protocadherin alpha 10 isoform 1 precursor PCDHA3 0.790 protocadherin alpha 3 isoform 1 precursor PCDHA7 0.786 protocadherin alpha 7 isoform 1 precursor PCDHA5 0.786 protocadherin alpha 5 isoform 1 precursor PCDHA9 0.777 protocadherin alpha 9 isoform 1 precursor PCDHA13 0.638 protocadherin alpha 13 isoform 2 precursor PCDHA8 0.635 protocadherin alpha 8 isoform 2 precursor PCDHA4 0.632 protocadherin alpha 4 isoform 2 precursor PCDHA6 0.630 protocadherin alpha 6 isoform 2 precursor PCDHA1 0.629 protocadherin alpha 1 isoform 2 precursor PCDHA12 0.628 protocadherin alpha 12 isoform 2 precursor PCDHA2 0.626 protocadherin alpha 2 isoform 2 precursor PCDHA10 0.625 protocadherin alpha 10 isoform 2 precursor PCDHA3 0.623 protocadherin alpha 3 isoform 2 precursor PCDHA7 0.622 protocadherin alpha 7 isoform 2 precursor PCDHA5 0.622 protocadherin alpha 5 isoform 2 precursor PCDHA9 0.609 protocadherin alpha 9 isoform 2 precursor PCDHA10 0.411 protocadherin alpha 10 isoform 3 precursor PCDHA6 0.411 protocadherin alpha 6 isoform 3 precursor PCDHA1 0.410 protocadherin alpha 1 isoform 3 precursor PCDHGC3 0.312 protocadherin gamma subfamily C, 3 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.