PCDHA13 37315

Name: PCDHA13	Sequence: fasta or formatted (950aa)		NCBI GI: 9256580
Description: protocadherin alpha 13 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [807aa] protocadherin alpha 13 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 81 2 C cysteine 1.3 12 1 D aspartate 5.6 53 2 E glutamate 6.9 66 2 F phenylalanine 2.5 24 1 G glycine 7.4 70 2 H histidine 1.9 18 2 I isoleucine 4.2 40 3 K lysine 4.3 41 8 L leucine 10.3 98 3 M methionine 0.6 6 1 N asparagine 4.2 40 2 P proline 7.1 67 2 Q glutamine 3.6 34 2 R arginine 4.7 45 2 S serine 9.2 87 2 T threonine 5.5 52 2 V valine 8.6 82 2 W tryptophan 1.1 10 1 Y tyrosine 2.5 24 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 13 isoform 1 precursor PCDHA13 0.832 protocadherin alpha 13 isoform 2 precursor PCDHA3 0.818 protocadherin alpha 3 isoform 1 precursor PCDHA4 0.813 protocadherin alpha 4 isoform 1 precursor PCDHA8 0.808 protocadherin alpha 8 isoform 1 precursor PCDHA6 0.804 protocadherin alpha 6 isoform 1 precursor PCDHA11 0.803 protocadherin alpha 11 isoform 1 precursor PCDHA2 0.801 protocadherin alpha 2 isoform 1 precursor PCDHA9 0.798 protocadherin alpha 9 isoform 1 precursor PCDHA1 0.798 protocadherin alpha 1 isoform 1 precursor PCDHA5 0.797 protocadherin alpha 5 isoform 1 precursor PCDHA7 0.794 protocadherin alpha 7 isoform 1 precursor PCDHA12 0.789 protocadherin alpha 12 isoform 1 precursor PCDHA10 0.782 protocadherin alpha 10 isoform 1 precursor PCDHA3 0.650 protocadherin alpha 3 isoform 2 precursor PCDHA4 0.646 protocadherin alpha 4 isoform 2 precursor PCDHA8 0.642 protocadherin alpha 8 isoform 2 precursor PCDHA6 0.639 protocadherin alpha 6 isoform 2 precursor PCDHA11 0.636 protocadherin alpha 11 isoform 2 precursor PCDHA2 0.634 protocadherin alpha 2 isoform 2 precursor PCDHA5 0.634 protocadherin alpha 5 isoform 2 precursor PCDHA7 0.631 protocadherin alpha 7 isoform 2 precursor PCDHA9 0.630 protocadherin alpha 9 isoform 2 precursor PCDHA1 0.630 protocadherin alpha 1 isoform 2 precursor PCDHA12 0.624 protocadherin alpha 12 isoform 2 precursor PCDHA10 0.617 protocadherin alpha 10 isoform 2 precursor PCDHA6 0.415 protocadherin alpha 6 isoform 3 precursor PCDHA1 0.411 protocadherin alpha 1 isoform 3 precursor PCDHA10 0.400 protocadherin alpha 10 isoform 3 precursor PCDHGA12 0.322 protocadherin gamma subfamily A, 12 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.