PCDHA5 37320

Name: PCDHA5	Sequence: fasta or formatted (936aa)		NCBI GI: 9256590
Description: protocadherin alpha 5 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [816aa] protocadherin alpha 5 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 73 2 C cysteine 1.1 10 1 D aspartate 5.8 54 2 E glutamate 6.9 65 3 F phenylalanine 3.0 28 2 G glycine 6.7 63 2 H histidine 1.6 15 1 I isoleucine 4.0 37 2 K lysine 4.7 44 8 L leucine 10.6 99 4 M methionine 0.7 7 1 N asparagine 4.9 46 2 P proline 6.6 62 2 Q glutamine 3.4 32 2 R arginine 5.4 51 3 S serine 9.1 85 2 T threonine 4.9 46 2 V valine 9.2 86 3 W tryptophan 0.9 8 1 Y tyrosine 2.7 25 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 5 isoform 1 precursor PCDHA5 0.828 protocadherin alpha 5 isoform 2 precursor PCDHA4 0.826 protocadherin alpha 4 isoform 1 precursor PCDHA8 0.825 protocadherin alpha 8 isoform 1 precursor PCDHA1 0.823 protocadherin alpha 1 isoform 1 precursor PCDHA6 0.817 protocadherin alpha 6 isoform 1 precursor PCDHA3 0.816 protocadherin alpha 3 isoform 1 precursor PCDHA7 0.814 protocadherin alpha 7 isoform 1 precursor PCDHA13 0.813 protocadherin alpha 13 isoform 1 precursor PCDHA2 0.808 protocadherin alpha 2 isoform 1 precursor PCDHA11 0.800 protocadherin alpha 11 isoform 1 precursor PCDHA9 0.799 protocadherin alpha 9 isoform 1 precursor PCDHA10 0.795 protocadherin alpha 10 isoform 1 precursor PCDHA12 0.787 protocadherin alpha 12 isoform 1 precursor PCDHA4 0.658 protocadherin alpha 4 isoform 2 precursor PCDHA8 0.658 protocadherin alpha 8 isoform 2 precursor PCDHA1 0.657 protocadherin alpha 1 isoform 2 precursor PCDHA3 0.651 protocadherin alpha 3 isoform 2 precursor PCDHA6 0.651 protocadherin alpha 6 isoform 2 precursor PCDHA13 0.647 protocadherin alpha 13 isoform 2 precursor PCDHA7 0.643 protocadherin alpha 7 isoform 2 precursor PCDHA2 0.641 protocadherin alpha 2 isoform 2 precursor PCDHA11 0.634 protocadherin alpha 11 isoform 2 precursor PCDHA9 0.633 protocadherin alpha 9 isoform 2 precursor PCDHA10 0.629 protocadherin alpha 10 isoform 2 precursor PCDHA12 0.620 protocadherin alpha 12 isoform 2 precursor PCDHA1 0.432 protocadherin alpha 1 isoform 3 precursor PCDHA6 0.418 protocadherin alpha 6 isoform 3 precursor PCDHA10 0.416 protocadherin alpha 10 isoform 3 precursor PCDHAC2 0.326 protocadherin alpha subfamily C, 2 isoform 1 precurso... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.