PCDHA4 37319

Name: PCDHA4	Sequence: fasta or formatted (947aa)		NCBI GI: 9256588
Description: protocadherin alpha 4 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [798aa] protocadherin alpha 4 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.1 77 2 C cysteine 1.1 10 1 D aspartate 6.1 58 2 E glutamate 7.2 68 2 F phenylalanine 3.0 28 1 G glycine 7.7 73 2 H histidine 1.6 15 1 I isoleucine 4.3 41 2 K lysine 4.6 44 8 L leucine 10.9 103 8 M methionine 0.4 4 1 N asparagine 4.2 40 2 P proline 6.7 63 2 Q glutamine 3.1 29 2 R arginine 4.9 46 2 S serine 9.0 85 2 T threonine 4.9 46 2 V valine 9.0 85 2 W tryptophan 1.1 10 1 Y tyrosine 2.3 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 4 isoform 1 precursor PCDHA3 0.844 protocadherin alpha 3 isoform 1 precursor PCDHA7 0.842 protocadherin alpha 7 isoform 1 precursor PCDHA9 0.837 protocadherin alpha 9 isoform 1 precursor PCDHA4 0.830 protocadherin alpha 4 isoform 2 precursor PCDHA2 0.823 protocadherin alpha 2 isoform 1 precursor PCDHA13 0.819 protocadherin alpha 13 isoform 1 precursor PCDHA5 0.816 protocadherin alpha 5 isoform 1 precursor PCDHA6 0.810 protocadherin alpha 6 isoform 1 precursor PCDHA1 0.808 protocadherin alpha 1 isoform 1 precursor PCDHA8 0.806 protocadherin alpha 8 isoform 1 precursor PCDHA11 0.802 protocadherin alpha 11 isoform 1 precursor PCDHA10 0.794 protocadherin alpha 10 isoform 1 precursor PCDHA12 0.791 protocadherin alpha 12 isoform 1 precursor PCDHA7 0.676 protocadherin alpha 7 isoform 2 precursor PCDHA3 0.674 protocadherin alpha 3 isoform 2 precursor PCDHA9 0.667 protocadherin alpha 9 isoform 2 precursor PCDHA2 0.655 protocadherin alpha 2 isoform 2 precursor PCDHA13 0.651 protocadherin alpha 13 isoform 2 precursor PCDHA5 0.650 protocadherin alpha 5 isoform 2 precursor PCDHA1 0.641 protocadherin alpha 1 isoform 2 precursor PCDHA6 0.640 protocadherin alpha 6 isoform 2 precursor PCDHA8 0.638 protocadherin alpha 8 isoform 2 precursor PCDHA11 0.636 protocadherin alpha 11 isoform 2 precursor PCDHA10 0.626 protocadherin alpha 10 isoform 2 precursor PCDHA12 0.624 protocadherin alpha 12 isoform 2 precursor PCDHAC2 0.453 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHA1 0.415 protocadherin alpha 1 isoform 3 precursor PCDHA6 0.411 protocadherin alpha 6 isoform 3 precursor PCDHA10 0.411 protocadherin alpha 10 isoform 3 precursor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.