PCDHA6 37321

Name: PCDHA6	Sequence: fasta or formatted (950aa)		NCBI GI: 9256592
Description: protocadherin alpha 6 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [803aa] protocadherin alpha 6 isoform 2 precursor alt prot [686aa] protocadherin alpha 6 isoform 3 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 83 2 C cysteine 1.3 12 1 D aspartate 6.4 61 2 E glutamate 6.8 65 2 F phenylalanine 3.1 29 1 G glycine 6.9 66 2 H histidine 1.8 17 1 I isoleucine 4.0 38 2 K lysine 4.4 42 8 L leucine 10.5 100 4 M methionine 1.1 10 2 N asparagine 4.7 45 2 P proline 6.5 62 2 Q glutamine 3.5 33 2 R arginine 4.7 45 2 S serine 9.1 86 3 T threonine 4.6 44 2 V valine 8.7 83 2 W tryptophan 0.7 7 1 Y tyrosine 2.3 22 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 6 isoform 1 precursor PCDHA8 0.901 protocadherin alpha 8 isoform 1 precursor PCDHA6 0.831 protocadherin alpha 6 isoform 2 precursor PCDHA3 0.828 protocadherin alpha 3 isoform 1 precursor PCDHA13 0.808 protocadherin alpha 13 isoform 1 precursor PCDHA4 0.808 protocadherin alpha 4 isoform 1 precursor PCDHA10 0.806 protocadherin alpha 10 isoform 1 precursor PCDHA5 0.804 protocadherin alpha 5 isoform 1 precursor PCDHA1 0.804 protocadherin alpha 1 isoform 1 precursor PCDHA11 0.801 protocadherin alpha 11 isoform 1 precursor PCDHA2 0.800 protocadherin alpha 2 isoform 1 precursor PCDHA9 0.798 protocadherin alpha 9 isoform 1 precursor PCDHA7 0.797 protocadherin alpha 7 isoform 1 precursor PCDHA12 0.788 protocadherin alpha 12 isoform 1 precursor PCDHA8 0.732 protocadherin alpha 8 isoform 2 precursor PCDHA3 0.659 protocadherin alpha 3 isoform 2 precursor PCDHA13 0.642 protocadherin alpha 13 isoform 2 precursor PCDHA5 0.641 protocadherin alpha 5 isoform 2 precursor PCDHA4 0.638 protocadherin alpha 4 isoform 2 precursor PCDHA10 0.637 protocadherin alpha 10 isoform 2 precursor PCDHA1 0.636 protocadherin alpha 1 isoform 2 precursor PCDHA7 0.633 protocadherin alpha 7 isoform 2 precursor PCDHA11 0.633 protocadherin alpha 11 isoform 2 precursor PCDHA2 0.632 protocadherin alpha 2 isoform 2 precursor PCDHA9 0.629 protocadherin alpha 9 isoform 2 precursor PCDHA12 0.624 protocadherin alpha 12 isoform 2 precursor PCDHA6 0.553 protocadherin alpha 6 isoform 3 precursor PCDHA10 0.415 protocadherin alpha 10 isoform 3 precursor PCDHA1 0.407 protocadherin alpha 1 isoform 3 precursor PCDHGC3 0.320 protocadherin gamma subfamily C, 3 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.