PCDHA13 3820

Name: PCDHA13	Sequence: fasta or formatted (807aa)		NCBI GI: 14165397
Description: protocadherin alpha 13 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [950aa] protocadherin alpha 13 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 9.0 73 2 C cysteine 1.5 12 1 D aspartate 5.7 46 2 E glutamate 6.8 55 2 F phenylalanine 2.6 21 1 G glycine 6.7 54 2 H histidine 2.0 16 2 I isoleucine 4.0 32 3 K lysine 3.1 25 2 L leucine 11.9 96 3 M methionine 0.6 5 1 N asparagine 4.0 32 2 P proline 6.2 50 2 Q glutamine 3.2 26 2 R arginine 5.0 40 2 S serine 9.0 73 2 T threonine 5.3 43 2 V valine 9.7 78 2 W tryptophan 0.9 7 1 Y tyrosine 2.9 23 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 13 isoform 2 precursor PCDHA13 0.990 protocadherin alpha 13 isoform 1 precursor PCDHA3 0.776 protocadherin alpha 3 isoform 2 precursor PCDHA3 0.774 protocadherin alpha 3 isoform 1 precursor PCDHA4 0.769 protocadherin alpha 4 isoform 2 precursor PCDHA4 0.769 protocadherin alpha 4 isoform 1 precursor PCDHA8 0.764 protocadherin alpha 8 isoform 2 precursor PCDHA8 0.764 protocadherin alpha 8 isoform 1 precursor PCDHA6 0.761 protocadherin alpha 6 isoform 2 precursor PCDHA6 0.760 protocadherin alpha 6 isoform 1 precursor PCDHA11 0.757 protocadherin alpha 11 isoform 2 precursor PCDHA11 0.757 protocadherin alpha 11 isoform 1 precursor PCDHA2 0.756 protocadherin alpha 2 isoform 2 precursor PCDHA5 0.755 protocadherin alpha 5 isoform 1 precursor PCDHA2 0.755 protocadherin alpha 2 isoform 1 precursor PCDHA5 0.755 protocadherin alpha 5 isoform 2 precursor PCDHA7 0.752 protocadherin alpha 7 isoform 1 precursor PCDHA1 0.751 protocadherin alpha 1 isoform 2 precursor PCDHA7 0.751 protocadherin alpha 7 isoform 2 precursor PCDHA9 0.750 protocadherin alpha 9 isoform 2 precursor PCDHA9 0.750 protocadherin alpha 9 isoform 1 precursor PCDHA1 0.750 protocadherin alpha 1 isoform 1 precursor PCDHA12 0.743 protocadherin alpha 12 isoform 2 precursor PCDHA12 0.743 protocadherin alpha 12 isoform 1 precursor PCDHA10 0.734 protocadherin alpha 10 isoform 2 precursor PCDHA10 0.734 protocadherin alpha 10 isoform 1 precursor PCDHA6 0.494 protocadherin alpha 6 isoform 3 precursor PCDHA1 0.490 protocadherin alpha 1 isoform 3 precursor PCDHA10 0.476 protocadherin alpha 10 isoform 3 precursor PCDHGA12 0.366 protocadherin gamma subfamily A, 12 isoform 2 precur... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.