PCDHA4 3825

Name: PCDHA4	Sequence: fasta or formatted (798aa)		NCBI GI: 14165413
Description: protocadherin alpha 4 isoform 2 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [947aa] protocadherin alpha 4 isoform 1 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.6 69 2 C cysteine 1.3 10 1 D aspartate 6.4 51 2 E glutamate 7.1 57 2 F phenylalanine 3.0 24 1 G glycine 7.1 57 2 H histidine 1.6 13 1 I isoleucine 4.1 33 2 K lysine 3.3 26 1 L leucine 12.4 99 8 M methionine 0.4 3 1 N asparagine 4.0 32 2 P proline 5.8 46 2 Q glutamine 2.6 21 2 R arginine 5.1 41 2 S serine 8.8 70 2 T threonine 4.6 37 2 V valine 10.3 82 2 W tryptophan 0.9 7 1 Y tyrosine 2.5 20 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha 4 isoform 2 precursor PCDHA4 0.997 protocadherin alpha 4 isoform 1 precursor PCDHA7 0.812 protocadherin alpha 7 isoform 2 precursor PCDHA7 0.812 protocadherin alpha 7 isoform 1 precursor PCDHA3 0.811 protocadherin alpha 3 isoform 2 precursor PCDHA3 0.809 protocadherin alpha 3 isoform 1 precursor PCDHA9 0.802 protocadherin alpha 9 isoform 2 precursor PCDHA9 0.801 protocadherin alpha 9 isoform 1 precursor PCDHA2 0.787 protocadherin alpha 2 isoform 2 precursor PCDHA2 0.786 protocadherin alpha 2 isoform 1 precursor PCDHA13 0.782 protocadherin alpha 13 isoform 2 precursor PCDHA13 0.781 protocadherin alpha 13 isoform 1 precursor PCDHA5 0.781 protocadherin alpha 5 isoform 2 precursor PCDHA5 0.781 protocadherin alpha 5 isoform 1 precursor PCDHA6 0.770 protocadherin alpha 6 isoform 2 precursor PCDHA1 0.769 protocadherin alpha 1 isoform 2 precursor PCDHA1 0.769 protocadherin alpha 1 isoform 1 precursor PCDHA6 0.768 protocadherin alpha 6 isoform 1 precursor PCDHA8 0.766 protocadherin alpha 8 isoform 2 precursor PCDHA8 0.766 protocadherin alpha 8 isoform 1 precursor PCDHA11 0.763 protocadherin alpha 11 isoform 2 precursor PCDHA11 0.763 protocadherin alpha 11 isoform 1 precursor PCDHA10 0.752 protocadherin alpha 10 isoform 2 precursor PCDHA10 0.752 protocadherin alpha 10 isoform 1 precursor PCDHA12 0.750 protocadherin alpha 12 isoform 2 precursor PCDHA12 0.750 protocadherin alpha 12 isoform 1 precursor PCDHA1 0.498 protocadherin alpha 1 isoform 3 precursor PCDHA6 0.494 protocadherin alpha 6 isoform 3 precursor PCDHA10 0.493 protocadherin alpha 10 isoform 3 precursor PCDHGC3 0.378 protocadherin gamma subfamily C, 3 isoform 2 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.