U2AF1L4 37491

Name: U2AF1L4	Sequence: fasta or formatted (181aa)		NCBI GI: 94536809
Description: U2 small nuclear RNA auxiliary factor 1-like 4 isoform 1		Referenced in: Capping and Splicing
Other entries for this name: alt prot [202aa] U2 small nuclear RNA auxiliary factor 1-like 4 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.8 5 1 C cysteine 5.0 9 2 D aspartate 3.9 7 1 E glutamate 9.4 17 2 F phenylalanine 6.6 12 1 G glycine 8.8 16 2 H histidine 6.1 11 2 I isoleucine 2.2 4 1 K lysine 3.3 6 1 L leucine 5.5 10 1 M methionine 2.2 4 1 N asparagine 5.5 10 1 P proline 4.4 8 2 Q glutamine 3.9 7 1 R arginine 11.6 21 3 S serine 5.5 10 1 T threonine 3.3 6 1 V valine 5.5 10 1 W tryptophan 1.1 2 1 Y tyrosine 3.3 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 U2 small nuclear RNA auxiliary factor 1-like 4 isofo... U2AF1 0.672 U2 small nuclear RNA auxillary factor 1 isoform b [H... U2AF1 0.672 U2 small nuclear RNA auxillary factor 1 isoform a [Ho... LOC441722 0.562 PREDICTED: similar to U2 small nuclear RNA auxillary... LOC441722 0.562 PREDICTED: similar to U2 small nuclear RNA auxillary... U2AF1L4 0.530 U2 small nuclear RNA auxiliary factor 1-like 4 isofo... U2AF1 0.484 U2 small nuclear RNA auxillary factor 1 isoform c [H... ZRSR2 0.218 U2 small nuclear RNA auxiliary factor 1-like 2 CPSF4 0.038 cleavage and polyadenylation specific factor 4, 30kDa... ZC3H10 0.032 zinc finger CCCH-type containing 10 CPSF4 0.030 cleavage and polyadenylation specific factor 4, 30k... HTATSF1 0.027 HIV-1 Tat specific factor 1 HTATSF1 0.027 HIV-1 Tat specific factor 1 ZC3H15 0.027 erythropoietin 4 immediate early response MKRN1 0.024 makorin ring finger protein 1 isoform 2 MKRN1 0.024 makorin ring finger protein 1 isoform 1 RBM4B 0.022 RNA binding motif protein 4B RBM4 0.022 RNA binding motif protein 4 RBM17 0.019 RNA binding motif protein 17 RBM17 0.019 RNA binding motif protein 17 HELZ 0.019 helicase with zinc finger domain PUF60 0.016 poly-U binding splicing factor 60KDa isoform c [Hom... PUF60 0.016 poly-U binding splicing factor 60KDa isoform b [Homo... PUF60 0.016 poly-U binding splicing factor 60KDa isoform a [Homo... PABPC1 0.016 poly(A) binding protein, cytoplasmic 1 PABPC3 0.016 poly(A) binding protein, cytoplasmic 3 ZC3H3 0.016 zinc finger CCCH-type containing 3 RNF113A 0.013 ring finger protein 113A MKRN2 0.013 makorin ring finger protein 2 UNK 0.013 zinc finger CCCH-type domain containing 5 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.