PUF60 12414

Name: PUF60	Sequence: fasta or formatted (516aa)		NCBI GI: 209862867
Description: poly-U binding splicing factor 60KDa isoform c		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [542aa] poly-U binding splicing factor 60KDa isoform b alt prot [559aa] poly-U binding splicing factor 60KDa isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 11.6 60 5 C cysteine 0.6 3 1 D aspartate 4.1 21 3 E glutamate 7.9 41 4 F phenylalanine 3.1 16 1 G glycine 7.2 37 2 H histidine 1.4 7 1 I isoleucine 5.6 29 2 K lysine 5.6 29 2 L leucine 8.1 42 2 M methionine 3.7 19 1 N asparagine 2.3 12 1 P proline 6.8 35 2 Q glutamine 6.8 35 4 R arginine 3.7 19 1 S serine 6.4 33 2 T threonine 5.0 26 2 V valine 7.6 39 2 W tryptophan 0.4 2 1 Y tyrosine 2.1 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 poly-U binding splicing factor 60KDa isoform c [Hom... PUF60 1.000 poly-U binding splicing factor 60KDa isoform a [Homo... PUF60 0.955 poly-U binding splicing factor 60KDa isoform b [Homo... PABPC4 0.083 poly A binding protein, cytoplasmic 4 isoform 3 [Ho... PABPC4 0.083 poly A binding protein, cytoplasmic 4 isoform 2 [Homo... PABPC4 0.083 poly A binding protein, cytoplasmic 4 isoform 1 [Ho... RBM39 0.078 RNA binding motif protein 39 isoform a RBM39 0.078 RNA binding motif protein 39 isoform b PABPC1 0.074 poly(A) binding protein, cytoplasmic 1 PABPC4L 0.072 poly(A) binding protein, cytoplasmic 4-like RBM23 0.071 RNA binding motif protein 23 isoform 3 RBM23 0.071 RNA binding motif protein 23 isoform 1 RBM23 0.071 RNA binding motif protein 23 isoform 2 PABPC3 0.070 poly(A) binding protein, cytoplasmic 3 PABPC1L 0.067 poly(A)-binding protein, cytoplasmic 1-like PABPC1L2B 0.064 poly(A) binding protein, cytoplasmic 1-like 2B [Hom... PABPC1L2A 0.064 poly(A) binding protein, cytoplasmic 1-like 2A [Homo... SF3B4 0.062 splicing factor 3b, subunit 4 TIA1 0.061 TIA1 protein isoform 1 PABPC5 0.061 poly(A) binding protein, cytoplasmic 5 TIAL1 0.059 TIA-1 related protein isoform 1 TIA1 0.059 TIA1 protein isoform 2 TIAL1 0.054 TIA-1 related protein isoform 2 BRUNOL4 0.051 bruno-like 4, RNA binding protein isoform 1 MSI2 0.051 musashi 2 isoform a MSI2 0.051 musashi 2 isoform b BRUNOL4 0.051 bruno-like 4, RNA binding protein isoform 4 BRUNOL4 0.051 bruno-like 4, RNA binding protein isoform 2 RBM17 0.050 RNA binding motif protein 17 RBM17 0.050 RNA binding motif protein 17 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.