U2AF1 34863

Name: U2AF1	Sequence: fasta or formatted (167aa)		NCBI GI: 68800138
Description: U2 small nuclear RNA auxillary factor 1 isoform c		Referenced in: Capping and Splicing
Other entries for this name: alt prot [240aa] U2 small nuclear RNA auxillary factor 1 isoform a alt prot [240aa] U2 small nuclear RNA auxillary factor 1 isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.4 4 1 C cysteine 3.0 5 2 D aspartate 5.4 9 1 E glutamate 13.2 22 2 F phenylalanine 5.4 9 2 G glycine 13.2 22 12 H histidine 3.0 5 1 I isoleucine 1.8 3 1 K lysine 3.6 6 2 L leucine 4.2 7 1 M methionine 3.0 5 1 N asparagine 4.2 7 2 P proline 1.8 3 1 Q glutamine 1.8 3 1 R arginine 18.6 31 3 S serine 5.4 9 1 T threonine 1.8 3 1 V valine 4.8 8 1 W tryptophan 0.6 1 1 Y tyrosine 3.0 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 U2 small nuclear RNA auxillary factor 1 isoform c [H... U2AF1 1.000 U2 small nuclear RNA auxillary factor 1 isoform b [H... U2AF1 1.000 U2 small nuclear RNA auxillary factor 1 isoform a [Ho... LOC441722 0.878 PREDICTED: similar to U2 small nuclear RNA auxillary... LOC441722 0.866 PREDICTED: similar to U2 small nuclear RNA auxillary... U2AF1L4 0.547 U2 small nuclear RNA auxiliary factor 1-like 4 isofo... U2AF1L4 0.280 U2 small nuclear RNA auxiliary factor 1-like 4 isofo... ZRSR2 0.204 U2 small nuclear RNA auxiliary factor 1-like 2 SNRNP70 0.061 U1 small nuclear ribonucleoprotein 70 kDa SCAF1 0.058 SR-related CTD-associated factor 1 DDX46 0.058 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 RSRC2 0.058 arginine/serine-rich coiled-coil 2 isoform b RSRC2 0.058 arginine/serine-rich coiled-coil 2 isoform a PRPF38B 0.058 PRP38 pre-mRNA processing factor 38 (yeast) domain ... SFRS2 0.058 splicing factor, arginine/serine-rich 2 RBM17 0.052 RNA binding motif protein 17 RBM17 0.052 RNA binding motif protein 17 ACIN1 0.052 apoptotic chromatin condensation inducer 1 AVEN 0.052 cell death regulator aven SNRNP27 0.052 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Ho... RBM25 0.052 RNA binding motif protein 25 LOC100288548 0.052 PREDICTED: hypothetical protein XP_002342129 TRA2A 0.052 transformer-2 alpha FBL 0.049 fibrillarin RDBP 0.049 RD RNA-binding protein TRA2B 0.049 splicing factor, arginine/serine-rich 10 DHX57 0.049 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57 CROP 0.046 cisplatin resistance-associated overexpressed protei... CROP 0.046 cisplatin resistance-associated overexpressed protei... RBM39 0.046 RNA binding motif protein 39 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.