CPSF4 33368

Name: CPSF4	Sequence: fasta or formatted (269aa)		NCBI GI: 5729939
Description: cleavage and polyadenylation specific factor 4, 30kDa isoform 1		Referenced in: Polyadenylation Zinc Finger Proteins
Other entries for this name: alt prot [244aa] cleavage and polyadenylation specific factor 4, 30kDa isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.1 11 2 C cysteine 6.7 18 1 D aspartate 3.0 8 1 E glutamate 5.9 16 1 F phenylalanine 5.2 14 2 G glycine 8.2 22 2 H histidine 4.1 11 1 I isoleucine 3.7 10 2 K lysine 7.1 19 2 L leucine 6.7 18 1 M methionine 3.0 8 1 N asparagine 3.3 9 2 P proline 8.9 24 2 Q glutamine 7.4 20 2 R arginine 4.8 13 2 S serine 6.7 18 3 T threonine 3.7 10 2 V valine 4.1 11 2 W tryptophan 0.7 2 1 Y tyrosine 2.6 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cleavage and polyadenylation specific factor 4, 30kDa... CPSF4 0.891 cleavage and polyadenylation specific factor 4, 30k... CPSF4L 0.429 cleavage and polyadenylation specific factor 4-like... ZC3H3 0.120 zinc finger CCCH-type containing 3 ZC3H6 0.057 zinc finger CCCH-type domain containing 6 ZC3H4 0.055 zinc finger CCCH-type containing 4 ZC3H8 0.055 zinc finger CCCH-type containing 8 UNK 0.046 zinc finger CCCH-type domain containing 5 MKRN2 0.045 makorin ring finger protein 2 ZC3H14 0.041 zinc finger CCCH-type containing 14 isoform 6 [Homo... ZC3H14 0.041 zinc finger CCCH-type containing 14 isoform 5 [Homo... ZC3H14 0.041 zinc finger CCCH-type containing 14 isoform 4 ZC3H14 0.041 zinc finger CCCH-type containing 14 isoform 2 ZC3H11A 0.039 zinc finger CCCH-type containing 11A ZC3H14 0.036 zinc finger CCCH-type containing 14 isoform 3 ZC3H14 0.036 zinc finger CCCH-type containing 14 isoform 1 MKRN1 0.036 makorin ring finger protein 1 isoform 2 MKRN1 0.036 makorin ring finger protein 1 isoform 1 ZC3H10 0.034 zinc finger CCCH-type containing 10 MBNL1 0.029 muscleblind-like 1 isoform e MBNL1 0.029 muscleblind-like 1 isoform d U2AF1L4 0.025 U2 small nuclear RNA auxiliary factor 1-like 4 isofo... ZC3H15 0.023 erythropoietin 4 immediate early response ZFP36L1 0.021 butyrate response factor 1 ZFP36L2 0.021 zinc finger protein 36, C3H type-like 2 MBNL1 0.021 muscleblind-like 1 isoform g MBNL1 0.021 muscleblind-like 1 isoform f MBNL1 0.021 muscleblind-like 1 isoform c MBNL1 0.021 muscleblind-like 1 isoform b MBNL1 0.021 muscleblind-like 1 isoform a Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.