CPSF4 2817

Name: CPSF4	Sequence: fasta or formatted (244aa)		NCBI GI: 125987603
Description: cleavage and polyadenylation specific factor 4, 30kDa isoform 2		Referenced in: Polyadenylation Zinc Finger Proteins
Other entries for this name: alt prot [269aa] cleavage and polyadenylation specific factor 4, 30kDa isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.5 11 2 C cysteine 7.4 18 1 D aspartate 3.3 8 1 E glutamate 6.6 16 1 F phenylalanine 5.7 14 2 G glycine 9.0 22 2 H histidine 4.5 11 1 I isoleucine 3.7 9 2 K lysine 7.8 19 2 L leucine 6.1 15 1 M methionine 3.3 8 1 N asparagine 2.0 5 1 P proline 8.6 21 2 Q glutamine 6.1 15 2 R arginine 4.9 12 2 S serine 4.5 11 2 T threonine 3.7 9 2 V valine 4.5 11 2 W tryptophan 0.8 2 1 Y tyrosine 2.9 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 cleavage and polyadenylation specific factor 4, 30k... CPSF4 0.973 cleavage and polyadenylation specific factor 4, 30kDa... CPSF4L 0.468 cleavage and polyadenylation specific factor 4-like... ZC3H3 0.135 zinc finger CCCH-type containing 3 ZC3H6 0.062 zinc finger CCCH-type domain containing 6 ZC3H4 0.060 zinc finger CCCH-type containing 4 ZC3H8 0.060 zinc finger CCCH-type containing 8 UNK 0.057 zinc finger CCCH-type domain containing 5 ZC3H14 0.045 zinc finger CCCH-type containing 14 isoform 6 [Homo... ZC3H14 0.045 zinc finger CCCH-type containing 14 isoform 5 [Homo... ZC3H14 0.045 zinc finger CCCH-type containing 14 isoform 4 ZC3H14 0.045 zinc finger CCCH-type containing 14 isoform 2 ZC3H11A 0.043 zinc finger CCCH-type containing 11A ZC3H14 0.039 zinc finger CCCH-type containing 14 isoform 3 ZC3H14 0.039 zinc finger CCCH-type containing 14 isoform 1 MKRN2 0.039 makorin ring finger protein 2 MKRN1 0.039 makorin ring finger protein 1 isoform 2 MKRN1 0.039 makorin ring finger protein 1 isoform 1 ZC3H10 0.037 zinc finger CCCH-type containing 10 MBNL1 0.031 muscleblind-like 1 isoform e MBNL1 0.031 muscleblind-like 1 isoform d ZC3H15 0.025 erythropoietin 4 immediate early response ZFP36L1 0.023 butyrate response factor 1 ZFP36L2 0.023 zinc finger protein 36, C3H type-like 2 MBNL1 0.023 muscleblind-like 1 isoform g MBNL1 0.023 muscleblind-like 1 isoform f MBNL1 0.023 muscleblind-like 1 isoform c MBNL1 0.023 muscleblind-like 1 isoform b MBNL1 0.023 muscleblind-like 1 isoform a U2AF1L4 0.021 U2 small nuclear RNA auxiliary factor 1-like 4 isofo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.