Guide to the Human Genome
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Name: C16orf68 Sequence: fasta or formatted (404aa) NCBI GI: 94536786
Description:

hypothetical protein LOC79091

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         38           3
 C cysteine            1.7          7           1
 D aspartate           8.4         34           3
 E glutamate           6.4         26           2
 F phenylalanine       3.5         14           1
 G glycine             6.7         27           3
 H histidine           3.7         15           1
 I isoleucine          3.5         14           2
 K lysine              3.2         13           1
 L leucine            12.1         49           3
 M methionine          1.7          7           1
 N asparagine          2.0          8           1
 P proline             4.5         18           2
 Q glutamine           4.2         17           2
 R arginine            5.4         22           2
 S serine              6.4         26           1
 T threonine           6.7         27           2
 V valine              7.2         29           2
 W tryptophan          1.5          6           1
 Y tyrosine            1.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC79091 
C13orf39              0.035   hypothetical protein LOC196541 
FAM119B               0.032   hypothetical protein LOC25895 isoform a 
C14orf138             0.032   hypothetical protein LOC79609 isoform b 
C14orf138             0.032   hypothetical protein LOC79609 isoform a 
FAM119A               0.025   hypothetical protein LOC151194 
FAM119A               0.025   hypothetical protein LOC151194 
FAM86B2               0.023   PREDICTED: hypothetical protein LOC653333 
C17orf95              0.022   hypothetical protein LOC124512 
FAM86A                0.020   hypothetical protein LOC196483 isoform 1 
FAM86A                0.019   hypothetical protein LOC196483 isoform 2 
FAM119B               0.019   hypothetical protein LOC25895 isoform b 
FAM86B2               0.016   hypothetical protein LOC653333 
C12orf72              0.016   hypothetical protein LOC254013 
C12orf72              0.016   hypothetical protein LOC254013 
C12orf72              0.016   hypothetical protein LOC254013 
FAM86B1               0.016   hypothetical protein LOC85002 
C2orf34               0.011   hypothetical protein LOC79823 
TNRC6C                0.010   trinucleotide repeat containing 6C isoform 1 
TNRC6C                0.010   trinucleotide repeat containing 6C isoform 2 
ELFN1                 0.010   extracellular leucine-rich repeat and fibronectin t...
PLCB2                 0.010   phospholipase C, beta 2 
CCDC9                 0.010   coiled-coil domain containing 9 
PRMT6                 0.009   protein arginine methyltransferase 6 
ACBD4                 0.009   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.009   acyl-Coenzyme A binding domain containing 4 isoform ...
FLG2                  0.008   filaggrin family member 2 
PPP1R15A              0.008   protein phosphatase 1, regulatory subunit 15A [Homo...
RNPEP                 0.008   arginyl aminopeptidase 
TCF20                 0.008   transcription factor 20 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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