Guide to the Human Genome
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Name: PLCB2 Sequence: fasta or formatted (1185aa) NCBI GI: 95147333
Description:

phospholipase C, beta 2

Referenced in:

Inositol Pathways
Lipid Metabolism

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         87           2
 C cysteine            1.4         17           1
 D aspartate           4.1         48           2
 E glutamate          10.6        126           7
 F phenylalanine       4.5         53           2
 G glycine             5.6         66           2
 H histidine           1.8         21           2
 I isoleucine          3.8         45           2
 K lysine              8.0         95           3
 L leucine             9.6        114           3
 M methionine          3.5         41           2
 N asparagine          3.6         43           2
 P proline             6.4         76           2
 Q glutamine           4.4         52           2
 R arginine            5.4         64           2
 S serine              6.9         82           3
 T threonine           4.4         52           2
 V valine              5.4         64           3
 W tryptophan          0.8         10           1
 Y tyrosine            2.4         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   phospholipase C, beta 2 
PLCB1                 0.448   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB1                 0.442   phosphoinositide-specific phospholipase C beta 1 iso...
PLCB3                 0.418   phospholipase C beta 3 
PLCB4                 0.283   phospholipase C beta 4 isoform a 
PLCB4                 0.283   phospholipase C beta 4 isoform b 
PLCD4                 0.133   phospholipase C, delta 4 
PLCD3                 0.131   phospholipase C delta 3 
PLCD1                 0.127   phospholipase C, delta 1 isoform 2 
PLCD1                 0.127   phospholipase C, delta 1 isoform 1 
PLCL2                 0.119   phospholipase C-like 2 isoform 1 
PLCL2                 0.119   phospholipase C-like 2 isoform 2 
PLCZ1                 0.116   phospholipase C, zeta 1 
PLCH2                 0.110   phospholipase C, eta 2 
PLCL1                 0.108   phospholipase C-like 1 isoform a 
PLCL1                 0.108   phospholipase C-like 1 isoform b 
PLCE1                 0.065   phospholipase C, epsilon 1 
PLCH1                 0.061   phospholipase C eta 1 isoform c 
PLCH1                 0.061   phospholipase C eta 1 isoform a 
PLCH1                 0.061   phospholipase C eta 1 isoform b 
PLCG1                 0.055   phospholipase C, gamma 1 isoform a 
PLCG1                 0.055   phospholipase C, gamma 1 isoform b 
PLCG2                 0.053   phospholipase C, gamma 2 
TCHH                  0.016   trichohyalin 
LOC645202             0.016   PREDICTED: hypothetical protein LOC645202 
DCTN1                 0.014   dynactin 1 isoform 1 
LOC100133220          0.014   PREDICTED: hypothetical protein 
GOLGA4                0.014   golgi autoantigen, golgin subfamily a, 4 
DCTN1                 0.013   dynactin 1 isoform 4 
DCTN1                 0.013   dynactin 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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