TCF20 25649

Name: TCF20	Sequence: fasta or formatted (1938aa)		NCBI GI: 31652242
Description: transcription factor 20 isoform 2		Referenced in: Additional Genes in Development
Other entries for this name: alt prot [1960aa] transcription factor 20 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 123 7 C cysteine 1.3 25 2 D aspartate 3.6 70 2 E glutamate 6.0 117 5 F phenylalanine 2.2 42 1 G glycine 9.7 188 4 H histidine 3.1 60 3 I isoleucine 2.2 42 2 K lysine 6.0 117 3 L leucine 5.8 112 2 M methionine 2.1 40 2 N asparagine 3.8 74 2 P proline 9.4 182 6 Q glutamine 8.5 165 6 R arginine 5.6 109 3 S serine 12.9 250 7 T threonine 4.4 86 2 V valine 3.9 75 2 W tryptophan 0.5 9 1 Y tyrosine 2.7 52 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 transcription factor 20 isoform 2 TCF20 0.997 transcription factor 20 isoform 1 RAI1 0.057 retinoic acid induced 1 ARID1A 0.017 AT rich interactive domain 1A isoform a HRNR 0.016 hornerin ARID1A 0.016 AT rich interactive domain 1A isoform b FLG 0.015 filaggrin ARID1B 0.014 AT rich interactive domain 1B (SWI1-like) isoform 1 ... ARID1B 0.014 AT rich interactive domain 1B (SWI1-like) isoform 3 ... FLG2 0.014 filaggrin family member 2 ARID1B 0.013 AT rich interactive domain 1B (SWI1-like) isoform 2 ... MLL3 0.013 myeloid/lymphoid or mixed-lineage leukemia 3 MLL2 0.011 myeloid/lymphoid or mixed-lineage leukemia 2 MED15 0.010 mediator complex subunit 15 isoform a MED15 0.010 mediator complex subunit 15 isoform b PCLO 0.010 piccolo isoform 2 PCLO 0.010 piccolo isoform 1 SRRM2 0.010 splicing coactivator subunit SRm300 CHD7 0.009 chromodomain helicase DNA binding protein 7 NOLC1 0.009 nucleolar and coiled-body phosphoprotein 1 PAXIP1 0.009 PAX interacting protein 1 SUPT5H 0.009 suppressor of Ty 5 homolog isoform b SUPT5H 0.009 suppressor of Ty 5 homolog isoform a SUPT5H 0.009 suppressor of Ty 5 homolog isoform a SUPT5H 0.009 suppressor of Ty 5 homolog isoform a NCOA6 0.009 nuclear receptor coactivator 6 MAML2 0.008 mastermind-like 2 MAPT 0.008 microtubule-associated protein tau isoform 6 MAPT 0.008 microtubule-associated protein tau isoform 1 BASP1 0.008 brain abundant, membrane attached signal protein 1 [... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.