Guide to the Human Genome
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Name: FAM119B Sequence: fasta or formatted (149aa) NCBI GI: 45827723
Description:

hypothetical protein LOC25895 isoform b

Referenced in:

Liver

Other entries for this name:
alt prot [226aa] hypothetical protein LOC25895 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         12           2
 C cysteine            3.4          5           1
 D aspartate           4.7          7           2
 E glutamate           8.1         12           1
 F phenylalanine       4.7          7           1
 G glycine            12.1         18           2
 H histidine           2.7          4           2
 I isoleucine          4.0          6           1
 K lysine              2.7          4           2
 L leucine             7.4         11           1
 M methionine          2.7          4           1
 N asparagine          2.0          3           1
 P proline             3.4          5           1
 Q glutamine           3.4          5           1
 R arginine            5.4          8           1
 S serine              9.4         14           2
 T threonine           4.0          6           1
 V valine              7.4         11           1
 W tryptophan          2.0          3           1
 Y tyrosine            2.7          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC25895 isoform b 
FAM119B               0.611   hypothetical protein LOC25895 isoform a 
FAM119A               0.161   hypothetical protein LOC151194 
FAM119A               0.161   hypothetical protein LOC151194 
C13orf39              0.084   hypothetical protein LOC196541 
C14orf138             0.077   hypothetical protein LOC79609 isoform b 
C14orf138             0.077   hypothetical protein LOC79609 isoform a 
C1orf156              0.067   hypothetical protein MGC9084 
C16orf68              0.053   hypothetical protein LOC79091 
C17orf95              0.042   hypothetical protein LOC124512 
FAM86A                0.028   hypothetical protein LOC196483 isoform 2 
FAM86A                0.028   hypothetical protein LOC196483 isoform 1 
FAM86B2               0.025   hypothetical protein LOC653333 
C12orf72              0.025   hypothetical protein LOC254013 
C12orf72              0.025   hypothetical protein LOC254013 
C12orf72              0.025   hypothetical protein LOC254013 
FAM86B1               0.025   hypothetical protein LOC85002 
PRMT6                 0.025   protein arginine methyltransferase 6 
FAM86B2               0.025   PREDICTED: hypothetical protein LOC653333 
PRMT3                 0.021   protein arginine methyltransferase 3 isoform 3 [Hom...
PRMT3                 0.021   protein arginine methyltransferase 3 isoform 2 [Hom...
PRMT3                 0.021   protein arginine methyltransferase 3 isoform 1 [Homo...
CARM1                 0.014   coactivator-associated arginine methyltransferase 1 ...
PRMT8                 0.014   HMT1 hnRNP methyltransferase-like 4 
HSD11B1               0.014   11-beta-hydroxysteroid dehydrogenase 1 
HSD11B1               0.014   11-beta-hydroxysteroid dehydrogenase 1 
PRMT1                 0.011   HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo...
PRMT1                 0.011   HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo...
PRMT1                 0.011   HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo...
PRMT10                0.011   protein arginine methyltransferase 10 (putative) [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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