Guide to the Human Genome
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Name: FAM86B2 Sequence: fasta or formatted (329aa) NCBI GI: 239754822
Description:

PREDICTED: hypothetical protein LOC653333

Not currently referenced in the text

Other entries for this name:
alt prot {330aa} hypothetical protein LOC653333
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         31           2
 C cysteine            2.1          7           1
 D aspartate           3.6         12           1
 E glutamate           8.2         27           2
 F phenylalanine       3.0         10           1
 G glycine             5.2         17           2
 H histidine           3.6         12           2
 I isoleucine          3.6         12           2
 K lysine              3.3         11           2
 L leucine            13.1         43           3
 M methionine          1.5          5           1
 N asparagine          2.4          8           1
 P proline             5.2         17           3
 Q glutamine           4.0         13           1
 R arginine            5.5         18           1
 S serine              6.7         22           2
 T threonine           7.0         23           2
 V valine              7.6         25           2
 W tryptophan          1.8          6           1
 X unknown             0.6          2           1
 Y tyrosine            2.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: hypothetical protein LOC653333 
FAM86B2               0.916   hypothetical protein LOC653333 
FAM86A                0.894   hypothetical protein LOC196483 isoform 1 
FAM86B1               0.791   hypothetical protein LOC85002 
FAM86A                0.763   hypothetical protein LOC196483 isoform 2 
FAM86C                0.185   hypothetical protein LOC55199 isoform 3 
FAM86C                0.177   hypothetical protein LOC55199 isoform 1 
FAM86C                0.111   hypothetical protein LOC55199 isoform 2 
LOC100292173          0.052   PREDICTED: hypothetical protein 
LOC731551             0.047   PREDICTED: similar to ectonucleotide pyrophosphatas...
LOC650354             0.047   PREDICTED: similar to ectonucleotide pyrophosphatas...
FAM119B               0.043   hypothetical protein LOC25895 isoform a 
FAM119A               0.039   hypothetical protein LOC151194 
FAM119A               0.039   hypothetical protein LOC151194 
C14orf138             0.032   hypothetical protein LOC79609 isoform b 
C14orf138             0.032   hypothetical protein LOC79609 isoform a 
C16orf68              0.028   hypothetical protein LOC79091 
C2orf34               0.024   hypothetical protein LOC79823 
C13orf39              0.024   hypothetical protein LOC196541 
C17orf95              0.016   hypothetical protein LOC124512 
CDH10                 0.016   cadherin 10, type 2 preproprotein 
FAM119B               0.011   hypothetical protein LOC25895 isoform b 
C1orf156              0.009   hypothetical protein MGC9084 
C12orf72              0.009   hypothetical protein LOC254013 
C12orf72              0.009   hypothetical protein LOC254013 
C12orf72              0.009   hypothetical protein LOC254013 
GREB1                 0.008   GREB1 protein isoform a 
NBAS                  0.008   neuroblastoma-amplified protein 
LOC643677             0.008   hypothetical protein LOC643677 
LOC643677             0.008   PREDICTED: hypothetical protein LOC643677 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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