Guide to the Human Genome
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Name: C12orf72 Sequence: fasta or formatted (262aa) NCBI GI: 209529731
Description:

hypothetical protein LOC254013

Not currently referenced in the text

Other entries for this name:
alt mRNA {262aa} hypothetical protein LOC254013
alt mRNA {262aa} hypothetical protein LOC254013
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         17           2
 C cysteine            2.7          7           1
 D aspartate           5.7         15           1
 E glutamate           4.6         12           2
 F phenylalanine       3.4          9           1
 G glycine             8.0         21           2
 H histidine           3.1          8           2
 I isoleucine          5.0         13           1
 K lysine              3.4          9           2
 L leucine            14.5         38           3
 M methionine          1.5          4           1
 N asparagine          3.8         10           1
 P proline             5.7         15           1
 Q glutamine           4.2         11           1
 R arginine            5.3         14           1
 S serine              7.6         20           2
 T threonine           4.6         12           2
 V valine              3.8         10           2
 W tryptophan          4.2         11           2
 Y tyrosine            2.3          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC254013 
C12orf72              1.000   hypothetical protein LOC254013 
C12orf72              1.000   hypothetical protein LOC254013 
C13orf39              0.032   hypothetical protein LOC196541 
PRMT3                 0.028   protein arginine methyltransferase 3 isoform 3 [Hom...
PRMT3                 0.028   protein arginine methyltransferase 3 isoform 2 [Hom...
PRMT3                 0.028   protein arginine methyltransferase 3 isoform 1 [Homo...
C17orf95              0.026   hypothetical protein LOC124512 
C16orf68              0.025   hypothetical protein LOC79091 
C14orf138             0.025   hypothetical protein LOC79609 isoform b 
C14orf138             0.025   hypothetical protein LOC79609 isoform a 
FAM119A               0.023   hypothetical protein LOC151194 
FAM119A               0.023   hypothetical protein LOC151194 
PRMT6                 0.021   protein arginine methyltransferase 6 
METTL5                0.019   methyltransferase like 5 
FAM86A                0.019   hypothetical protein LOC196483 isoform 2 
FAM86A                0.019   hypothetical protein LOC196483 isoform 1 
FAM86B2               0.015   hypothetical protein LOC653333 
PRMT1                 0.015   HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo...
PRMT1                 0.015   HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo...
PRMT1                 0.015   HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo...
FAM86B1               0.015   hypothetical protein LOC85002 
CARM1                 0.013   coactivator-associated arginine methyltransferase 1 ...
FAM119B               0.013   hypothetical protein LOC25895 isoform b 
CD70                  0.011   tumor necrosis factor ligand superfamily, member 7 [H...
FAM86B2               0.011   PREDICTED: hypothetical protein LOC653333 
PRMT8                 0.011   HMT1 hnRNP methyltransferase-like 4 
FAM119B               0.011   hypothetical protein LOC25895 isoform a 
METTL10               0.009   methyltransferase like 10 
PRMT10                0.009   protein arginine methyltransferase 10 (putative) [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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