Guide to the Human Genome
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Name: FAM119B Sequence: fasta or formatted (226aa) NCBI GI: 45827721
Description:

hypothetical protein LOC25895 isoform a

Referenced in:

Liver

Other entries for this name:
alt prot [149aa] hypothetical protein LOC25895 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8         20           2
 C cysteine            1.8          4           1
 D aspartate           5.3         12           1
 E glutamate           6.6         15           1
 F phenylalanine       5.3         12           2
 G glycine             8.8         20           2
 H histidine           4.0          9           2
 I isoleucine          4.4         10           1
 K lysine              2.2          5           2
 L leucine            11.1         25           3
 M methionine          0.9          2           1
 N asparagine          3.5          8           1
 P proline             5.8         13           1
 Q glutamine           6.2         14           1
 R arginine            5.3         12           1
 S serine              5.3         12           1
 T threonine           4.0          9           1
 V valine              7.1         16           1
 W tryptophan          0.9          2           1
 Y tyrosine            2.7          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC25895 isoform a 
FAM119B               0.397   hypothetical protein LOC25895 isoform b 
FAM119A               0.301   hypothetical protein LOC151194 
FAM119A               0.301   hypothetical protein LOC151194 
C13orf39              0.142   hypothetical protein LOC196541 
C14orf138             0.135   hypothetical protein LOC79609 isoform a 
C14orf138             0.128   hypothetical protein LOC79609 isoform b 
C17orf95              0.066   hypothetical protein LOC124512 
FAM86B2               0.062   PREDICTED: hypothetical protein LOC653333 
FAM86A                0.062   hypothetical protein LOC196483 isoform 2 
FAM86A                0.062   hypothetical protein LOC196483 isoform 1 
FAM86B2               0.057   hypothetical protein LOC653333 
FAM86B1               0.057   hypothetical protein LOC85002 
C16orf68              0.057   hypothetical protein LOC79091 
C1orf156              0.046   hypothetical protein MGC9084 
C2orf34               0.034   hypothetical protein LOC79823 
C12orf72              0.014   hypothetical protein LOC254013 
C12orf72              0.014   hypothetical protein LOC254013 
C12orf72              0.014   hypothetical protein LOC254013 
PRMT6                 0.011   protein arginine methyltransferase 6 
LDHD                  0.009   D-lactate dehydrogenase isoform 2 precursor 
LDHD                  0.009   D-lactate dehydrogenase isoform 1 precursor 
ENTPD3                0.007   ectonucleoside triphosphate diphosphohydrolase 3 [H...
CARM1                 0.007   coactivator-associated arginine methyltransferase 1 ...
PRMT8                 0.007   HMT1 hnRNP methyltransferase-like 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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