Guide to the Human Genome
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Name: FAM119A Sequence: fasta or formatted (218aa) NCBI GI: 188528684
Description:

hypothetical protein LOC151194

Not currently referenced in the text

Other entries for this name:
alt mRNA {218aa} hypothetical protein LOC151194
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         19           2
 C cysteine            0.9          2           1
 D aspartate           4.6         10           1
 E glutamate           7.8         17           2
 F phenylalanine       4.6         10           1
 G glycine             6.0         13           1
 H histidine           4.1          9           1
 I isoleucine          5.5         12           2
 K lysine              4.6         10           1
 L leucine            12.8         28           2
 M methionine          1.4          3           1
 N asparagine          3.7          8           2
 P proline             2.8          6           2
 Q glutamine           4.6         10           1
 R arginine            5.0         11           1
 S serine              3.7          8           1
 T threonine           6.9         15           2
 V valine              8.3         18           2
 W tryptophan          1.4          3           1
 Y tyrosine            2.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC151194 
FAM119A               1.000   hypothetical protein LOC151194 
FAM119B               0.320   hypothetical protein LOC25895 isoform a 
C14orf138             0.199   hypothetical protein LOC79609 isoform a 
C14orf138             0.182   hypothetical protein LOC79609 isoform b 
C13orf39              0.170   hypothetical protein LOC196541 
FAM119B               0.112   hypothetical protein LOC25895 isoform b 
C17orf95              0.107   hypothetical protein LOC124512 
FAM86B1               0.063   hypothetical protein LOC85002 
FAM86B2               0.061   hypothetical protein LOC653333 
FAM86B2               0.061   PREDICTED: hypothetical protein LOC653333 
FAM86A                0.058   hypothetical protein LOC196483 isoform 2 
FAM86A                0.058   hypothetical protein LOC196483 isoform 1 
C16orf68              0.049   hypothetical protein LOC79091 
C1orf156              0.044   hypothetical protein MGC9084 
C12orf72              0.029   hypothetical protein LOC254013 
C12orf72              0.029   hypothetical protein LOC254013 
C12orf72              0.029   hypothetical protein LOC254013 
PECR                  0.024   peroxisomal trans-2-enoyl-CoA reductase 
C2orf34               0.022   hypothetical protein LOC79823 
THRB                  0.012   thyroid hormone receptor, beta 
THRB                  0.012   thyroid hormone receptor, beta 
THRB                  0.012   thyroid hormone receptor, beta 
PRMT6                 0.012   protein arginine methyltransferase 6 
PRMT10                0.012   protein arginine methyltransferase 10 (putative) [Ho...
TTC17                 0.010   tetratricopeptide repeat domain 17 
ADA                   0.007   adenosine deaminase 
FAT1                  0.007   FAT tumor suppressor 1 precursor 
BCAP29                0.007   B-cell receptor-associated protein BAP29 isoform a [...
ANKRD52               0.007   ankyrin repeat domain 52 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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