Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: C17orf95 Sequence: fasta or formatted (190aa) NCBI GI: 126012513
Description:

hypothetical protein LOC124512

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         15           2
 C cysteine            3.2          6           1
 D aspartate           5.8         11           1
 E glutamate           6.3         12           1
 F phenylalanine       3.7          7           2
 G glycine             4.7          9           1
 H histidine           3.7          7           1
 I isoleucine          6.3         12           2
 K lysine              4.2          8           1
 L leucine            13.7         26           2
 M methionine          2.6          5           1
 N asparagine          1.6          3           2
 P proline             5.8         11           2
 Q glutamine           3.7          7           1
 R arginine            2.6          5           2
 S serine              7.9         15           2
 T threonine           2.6          5           1
 V valine              7.4         14           2
 W tryptophan          3.7          7           1
 Y tyrosine            2.6          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC124512 
FAM119A               0.119   hypothetical protein LOC151194 
FAM119A               0.119   hypothetical protein LOC151194 
C14orf138             0.081   hypothetical protein LOC79609 isoform a 
C14orf138             0.078   hypothetical protein LOC79609 isoform b 
FAM119B               0.078   hypothetical protein LOC25895 isoform a 
C13orf39              0.073   hypothetical protein LOC196541 
C16orf68              0.046   hypothetical protein LOC79091 
C12orf72              0.038   hypothetical protein LOC254013 
C12orf72              0.038   hypothetical protein LOC254013 
C12orf72              0.038   hypothetical protein LOC254013 
FAM86B2               0.035   hypothetical protein LOC653333 
FAM86B1               0.035   hypothetical protein LOC85002 
FAM86A                0.035   hypothetical protein LOC196483 isoform 2 
FAM86A                0.035   hypothetical protein LOC196483 isoform 1 
FAM119B               0.032   hypothetical protein LOC25895 isoform b 
C1orf156              0.030   hypothetical protein MGC9084 
FAM86B2               0.027   PREDICTED: hypothetical protein LOC653333 
C2orf34               0.022   hypothetical protein LOC79823 
PRMT1                 0.013   HMT1 hnRNP methyltransferase-like 2 isoform 1 [Homo...
PRMT1                 0.013   HMT1 hnRNP methyltransferase-like 2 isoform 3 [Homo...
PRMT1                 0.013   HMT1 hnRNP methyltransferase-like 2 isoform 2 [Homo...
PRMT3                 0.011   protein arginine methyltransferase 3 isoform 3 [Hom...
PRMT3                 0.011   protein arginine methyltransferase 3 isoform 2 [Hom...
PRMT3                 0.011   protein arginine methyltransferase 3 isoform 1 [Homo...
FRZB                  0.008   frizzled-related protein 
PRMT6                 0.008   protein arginine methyltransferase 6 
PRMT8                 0.005   HMT1 hnRNP methyltransferase-like 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press