Guide to the Human Genome
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Name: ACBD4 Sequence: fasta or formatted (305aa) NCBI GI: 13376029
Description:

acyl-Coenzyme A binding domain containing 4 isoform 2

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [341aa] acyl-Coenzyme A binding domain containing 4 isoform 1
alt mRNA [305aa] acyl-Coenzyme A binding domain containing 4 isoform 2
alt prot [341aa] acyl-Coenzyme A binding domain containing 4 isoform 1
alt prot [268aa] acyl-Coenzyme A binding domain containing 4 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         16           2
 C cysteine            1.3          4           1
 D aspartate           3.9         12           1
 E glutamate           8.9         27           2
 F phenylalanine       3.9         12           2
 G glycine             6.2         19           2
 H histidine           0.3          1           1
 I isoleucine          1.6          5           1
 K lysine              4.6         14           2
 L leucine             8.5         26           2
 M methionine          3.6         11           1
 N asparagine          1.6          5           1
 P proline            13.4         41           2
 Q glutamine           6.2         19           1
 R arginine            7.2         22           2
 S serine              6.9         21           1
 T threonine           3.3         10           1
 V valine              7.2         22           2
 W tryptophan          3.0          9           1
 Y tyrosine            3.0          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   acyl-Coenzyme A binding domain containing 4 isoform ... 
ACBD4                 1.000   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.629   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.558   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD4                 0.558   acyl-Coenzyme A binding domain containing 4 isoform...
ACBD5                 0.203   acyl-Coenzyme A binding domain containing 5 isoform...
ACBD5                 0.203   acyl-Coenzyme A binding domain containing 5 isoform...
DBI                   0.078   diazepam binding inhibitor isoform 3 
DBI                   0.078   diazepam binding inhibitor isoform 1 
PECI                  0.078   peroxisomal D3,D2-enoyl-CoA isomerase isoform 1 [Hom...
DBI                   0.075   diazepam binding inhibitor isoform 2 
ACBD6                 0.058   acyl-coenzyme A binding domain containing 6 
ACBD7                 0.049   acyl-Coenzyme A binding domain containing 7 
ACBD3                 0.041   acyl-Coenzyme A binding domain containing 3 
LOC645877             0.026   PREDICTED: similar to hCG1652800 
LOC645877             0.026   PREDICTED: similar to hCG1652800 
LOC645877             0.026   PREDICTED: similar to diazepam binding inhibitor [Ho...
MAP3K10               0.024   mitogen-activated protein kinase kinase kinase 10 [H...
TTLL10                0.018   tubulin tyrosine ligase-like family, member 10 isof...
PLEKHA4               0.018   pleckstrin homology domain containing family A memb...
POLG                  0.016   DNA-directed DNA polymerase gamma 
POLG                  0.016   DNA-directed DNA polymerase gamma 
OBSL1                 0.016   obscurin-like 1 
ZFHX3                 0.016   AT-binding transcription factor 1 
TOX4                  0.016   epidermal Langerhans cell protein LCP1 
C16orf14              0.016   hypothetical protein LOC84331 
MED26                 0.015   mediator complex subunit 26 
ARHGAP17              0.015   nadrin isoform 1 
ARHGAP17              0.015   nadrin isoform 2 
ZNF828                0.015   zinc finger protein 828 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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