PCDHAC2 37324

Name: PCDHAC2	Sequence: fasta or formatted (1007aa)		NCBI GI: 9256600
Description: protocadherin alpha subfamily C, 2 isoform 1 precursor		Referenced in: Cadherins and Related Proteins
Other entries for this name: alt prot [884aa] protocadherin alpha subfamily C, 2 isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 75 2 C cysteine 1.1 11 2 D aspartate 5.4 54 1 E glutamate 6.4 64 2 F phenylalanine 2.7 27 2 G glycine 7.1 72 2 H histidine 1.7 17 2 I isoleucine 4.7 47 3 K lysine 3.9 39 8 L leucine 10.0 101 9 M methionine 0.9 9 1 N asparagine 5.3 53 3 P proline 7.1 72 2 Q glutamine 4.0 40 2 R arginine 5.3 53 2 S serine 9.0 91 2 T threonine 6.4 64 2 V valine 7.8 79 3 W tryptophan 0.5 5 1 Y tyrosine 3.4 34 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 protocadherin alpha subfamily C, 2 isoform 1 precurso... PCDHAC2 0.843 protocadherin alpha subfamily C, 2 isoform 2 precurs... PCDHA8 0.440 protocadherin alpha 8 isoform 1 precursor PCDHAC1 0.438 protocadherin alpha subfamily C, 1 isoform 1 precurs... PCDHA1 0.431 protocadherin alpha 1 isoform 1 precursor PCDHA2 0.429 protocadherin alpha 2 isoform 1 precursor PCDHGC5 0.336 protocadherin gamma subfamily C, 5 isoform 1 precurs... PCDHGA12 0.325 protocadherin gamma subfamily A, 12 isoform 1 precurs... PCDHGC5 0.323 protocadherin gamma subfamily C, 5 isoform 2 precurs... PCDH10 0.321 protocadherin 10 isoform 1 precursor PCDHGA8 0.320 protocadherin gamma subfamily A, 8 isoform 1 precurs... PCDH10 0.318 protocadherin 10 isoform 2 precursor PCDHGA6 0.317 protocadherin gamma subfamily A, 6 isoform 1 precurs... PCDHGA11 0.316 protocadherin gamma subfamily A, 11 isoform 1 precur... PCDHGA4 0.316 protocadherin gamma subfamily A, 4 isoform 1 precurs... PCDHGA9 0.312 protocadherin gamma subfamily A, 9 isoform 1 precurs... PCDHGA12 0.311 protocadherin gamma subfamily A, 12 isoform 2 precur... PCDHGA10 0.311 protocadherin gamma subfamily A, 10 isoform 1 precur... PCDHGA1 0.310 protocadherin gamma subfamily A, 1 isoform 1 precurs... PCDHGA3 0.309 protocadherin gamma subfamily A, 3 isoform 1 precurs... PCDHGA8 0.306 protocadherin gamma subfamily A, 8 isoform 2 precurso... PCDHGA5 0.305 protocadherin gamma subfamily A, 5 isoform 1 precurs... PCDHGC4 0.305 protocadherin gamma subfamily C, 4 isoform 1 precurs... PCDHGC3 0.304 protocadherin gamma subfamily C, 3 isoform 1 precurs... PCDHGA7 0.303 protocadherin gamma subfamily A, 7 isoform 1 precurs... PCDHGA4 0.302 protocadherin gamma subfamily A, 4 isoform 2 precurs... PCDHGA2 0.302 protocadherin gamma subfamily A, 2 isoform 1 precurs... PCDHA5 0.302 protocadherin alpha 5 isoform 1 precursor PCDHGA6 0.302 protocadherin gamma subfamily A, 6 isoform 2 precurs... PCDHGB2 0.301 protocadherin gamma subfamily B, 2 isoform 1 precurs... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.