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Search of human proteins with 91105159
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|91105159 CD14 antigen precursor [Homo sapiens]
(375 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|91105159 CD14 antigen precursor [Homo sapiens] 749 0.0
gi|4557417 CD14 antigen precursor [Homo sapiens] 749 0.0
gi|19718734 toll-like receptor 2 [Homo sapiens] 45 1e-04
gi|41350337 toll-like receptor 1 [Homo sapiens] 43 4e-04
gi|194440719 chondroadherin-like [Homo sapiens] 40 0.003
gi|88702793 slit-like 2 [Homo sapiens] 39 0.010
gi|4503743 flightless I homolog [Homo sapiens] 38 0.017
gi|226342935 podocan-like 1 isoform 3 [Homo sapiens] 37 0.022
gi|226342933 podocan-like 1 isoform 2 [Homo sapiens] 37 0.022
gi|226342931 podocan-like 1 isoform 1 [Homo sapiens] 37 0.022
gi|8394456 toll-like receptor 9 isoform A precursor [Homo sapiens] 36 0.049
gi|37221175 PH domain and leucine rich repeat protein phosphatas... 36 0.064
gi|54607118 leucine-rich repeats and immunoglobulin-like domains... 36 0.064
gi|23097240 leucine-rich repeats and WD repeat domain containing... 36 0.064
gi|4826876 osteomodulin [Homo sapiens] 35 0.11
gi|38348406 leucine rich repeat containing 33 [Homo sapiens] 35 0.11
gi|193083139 leucine rich repeat containing 32 precursor [Homo s... 35 0.14
gi|5031707 leucine rich repeat containing 32 precursor [Homo sap... 35 0.14
gi|46094076 tsukushin [Homo sapiens] 34 0.19
gi|188536110 leucine rich repeat neuronal 4 [Homo sapiens] 34 0.19
gi|50263044 leucine-rich repeat neuronal 6A [Homo sapiens] 34 0.24
gi|52426787 oligodendrocyte myelin glycoprotein [Homo sapiens] 33 0.32
gi|22749183 leucine rich repeat and Ig domain containing 2 [Homo... 33 0.32
gi|10190722 leucine-rich repeats and transmembrane domains 1 [Ho... 33 0.32
gi|110825984 malignant fibrous histiocytoma amplified sequence 1... 33 0.42
gi|45505137 podocan [Homo sapiens] 33 0.42
gi|239582714 leucine rich repeat containing 17 isoform 2 [Homo s... 33 0.55
gi|4505047 lumican precursor [Homo sapiens] 33 0.55
gi|157694513 leucine-rich repeat-containing G protein-coupled re... 32 0.71
gi|157426829 leucine rich repeat and Ig domain containing 3 [Hom... 32 0.71
>gi|91105159 CD14 antigen precursor [Homo sapiens]
Length = 375
Score = 749 bits (1933), Expect = 0.0
Identities = 375/375 (100%), Positives = 375/375 (100%)
Query: 1 MERASCLLLLLLPLVHVSATTPEPCELDDEDFRCVCNFSEPQPDWSEAFQCVSAVEVEIH 60
MERASCLLLLLLPLVHVSATTPEPCELDDEDFRCVCNFSEPQPDWSEAFQCVSAVEVEIH
Sbjct: 1 MERASCLLLLLLPLVHVSATTPEPCELDDEDFRCVCNFSEPQPDWSEAFQCVSAVEVEIH 60
Query: 61 AGGLNLEPFLKRVDADADPRQYADTVKALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKE 120
AGGLNLEPFLKRVDADADPRQYADTVKALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKE
Sbjct: 61 AGGLNLEPFLKRVDADADPRQYADTVKALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKE 120
Query: 121 LTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQA 180
LTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQA
Sbjct: 121 LTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQA 180
Query: 181 HSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV 240
HSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV
Sbjct: 181 HSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV 240
Query: 241 CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLR 300
CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLR
Sbjct: 241 CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLR 300
Query: 301 VLDLSCNRLNRAPQPDELPEVDNLTLDGNPFLVPGTALPHEGSMNSGVVPACARSTLSVG 360
VLDLSCNRLNRAPQPDELPEVDNLTLDGNPFLVPGTALPHEGSMNSGVVPACARSTLSVG
Sbjct: 301 VLDLSCNRLNRAPQPDELPEVDNLTLDGNPFLVPGTALPHEGSMNSGVVPACARSTLSVG 360
Query: 361 VSGTLVLLQGARGFA 375
VSGTLVLLQGARGFA
Sbjct: 361 VSGTLVLLQGARGFA 375
>gi|4557417 CD14 antigen precursor [Homo sapiens]
Length = 375
Score = 749 bits (1933), Expect = 0.0
Identities = 375/375 (100%), Positives = 375/375 (100%)
Query: 1 MERASCLLLLLLPLVHVSATTPEPCELDDEDFRCVCNFSEPQPDWSEAFQCVSAVEVEIH 60
MERASCLLLLLLPLVHVSATTPEPCELDDEDFRCVCNFSEPQPDWSEAFQCVSAVEVEIH
Sbjct: 1 MERASCLLLLLLPLVHVSATTPEPCELDDEDFRCVCNFSEPQPDWSEAFQCVSAVEVEIH 60
Query: 61 AGGLNLEPFLKRVDADADPRQYADTVKALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKE 120
AGGLNLEPFLKRVDADADPRQYADTVKALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKE
Sbjct: 61 AGGLNLEPFLKRVDADADPRQYADTVKALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKE 120
Query: 121 LTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQA 180
LTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQA
Sbjct: 121 LTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQA 180
Query: 181 HSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV 240
HSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV
Sbjct: 181 HSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGV 240
Query: 241 CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLR 300
CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLR
Sbjct: 241 CAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLR 300
Query: 301 VLDLSCNRLNRAPQPDELPEVDNLTLDGNPFLVPGTALPHEGSMNSGVVPACARSTLSVG 360
VLDLSCNRLNRAPQPDELPEVDNLTLDGNPFLVPGTALPHEGSMNSGVVPACARSTLSVG
Sbjct: 301 VLDLSCNRLNRAPQPDELPEVDNLTLDGNPFLVPGTALPHEGSMNSGVVPACARSTLSVG 360
Query: 361 VSGTLVLLQGARGFA 375
VSGTLVLLQGARGFA
Sbjct: 361 VSGTLVLLQGARGFA 375
>gi|19718734 toll-like receptor 2 [Homo sapiens]
Length = 784
Score = 44.7 bits (104), Expect = 1e-04
Identities = 38/138 (27%), Positives = 60/138 (43%), Gaps = 8/138 (5%)
Query: 195 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSL 254
+L LDLS+N + E L + C +P++Q L LR + + L ++
Sbjct: 361 SLEYLDLSENL-MVEEYLKNSACEDAWPSLQTLILRQNHLASLEKTGETLLTLK-NLTNI 418
Query: 255 DLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAPQ 314
D+S NS + C W + LNLS + V +P L +LD+S N LN
Sbjct: 419 DISKNSFHSMPET----CQWPEKMKYLNLSSTRIHSVTGCIPKTLEILDVSNNNLNLFSL 474
Query: 315 PDELPEVDNLTLDGNPFL 332
LP++ L + N +
Sbjct: 475 --NLPQLKELYISRNKLM 490
Score = 29.3 bits (64), Expect = 6.0
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Query: 253 SLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRA 312
SLDLS+N + N RC+ AL + +E+ L LDLS N L+
Sbjct: 56 SLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNL 115
Query: 313 PQP--DELPEVDNLTLDGNPFLVPG 335
L + L L GNP+ G
Sbjct: 116 SSSWFKPLSSLTFLNLLGNPYKTLG 140
>gi|41350337 toll-like receptor 1 [Homo sapiens]
Length = 786
Score = 43.1 bits (100), Expect = 4e-04
Identities = 52/200 (26%), Positives = 83/200 (41%), Gaps = 32/200 (16%)
Query: 172 LKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRN 231
LK LSI Q S F Q + +++++ + G R ++ LCP K +L N
Sbjct: 299 LKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTR-MVHMLCPSKISPFLHLDFSN 357
Query: 232 --------------TGMET---------PTGVCAALAAAGVQPHSLDLSHNSLRATVNPS 268
T +ET A + LD+S NS+ + +
Sbjct: 358 NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSV--SYDEK 415
Query: 269 APRCMWSSALNSLNLSFAGL-EQVPKGLPAKLRVLDLSCNRLNRAP-QPDELPEVDNLTL 326
C W+ +L SLN+S L + + + LP +++VLDL N++ P Q +L + L +
Sbjct: 416 KGDCSWTKSLLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIKSIPKQVVKLEALQELNV 475
Query: 327 DGNPFLVPGTALPHEGSMNS 346
N T LP GS +S
Sbjct: 476 AFNSL----TDLPGCGSFSS 491
>gi|194440719 chondroadherin-like [Homo sapiens]
Length = 762
Score = 40.0 bits (92), Expect = 0.003
Identities = 57/177 (32%), Positives = 75/177 (42%), Gaps = 35/177 (19%)
Query: 190 VRAFPALTSLDLSDN------PG-LGE-RGL--------------MAALCPHKFPAIQNL 227
+RA P+L SL L DN PG LG R L + AL P + ++ L
Sbjct: 517 LRALPSLFSLHLQDNAVDRLAPGDLGRTRALRWVYLSGNRITEVSLGALGPAR--ELEKL 574
Query: 228 AL-RNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFA 286
L RN E PTG L A L LS N LRA + + +L L L+ +
Sbjct: 575 HLDRNQLREVPTGALEGLPAL----LELQLSGNPLRALRDGAFQPV--GRSLQHLFLNSS 628
Query: 287 GLEQVP----KGLPAKLRVLDLSCNRLNRAPQPDELPEVDNLTLDGNPFLVPGTALP 339
GLEQ+ GL L+ L L N+L P L +++ + L NPF LP
Sbjct: 629 GLEQICPGAFSGLGPGLQSLHLQKNQLRALPALPSLSQLELIDLSSNPFHCDCQLLP 685
>gi|88702793 slit-like 2 [Homo sapiens]
Length = 673
Score = 38.5 bits (88), Expect = 0.010
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 254 LDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLR---VLDLSCNRLN 310
LDLSHNSL A P + ++ + +L L+ GL+Q+ +GL ++LR LD+S N+L
Sbjct: 174 LDLSHNSLLAL----EPGILDTANVEALRLAGLGLQQLDEGLFSRLRNLHDLDVSDNQLE 229
Query: 311 RAP 313
R P
Sbjct: 230 RVP 232
>gi|4503743 flightless I homolog [Homo sapiens]
Length = 1269
Score = 37.7 bits (86), Expect = 0.017
Identities = 44/150 (29%), Positives = 66/150 (44%), Gaps = 17/150 (11%)
Query: 188 EQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 247
E++ A L L +S N G +++L + + +L+N+G+ L+
Sbjct: 50 EELAALQKLEHLSVSHNNLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLDDLSV- 108
Query: 248 GVQPHSLDLSHNSLRATVNPSAPRCMWSSA-LNSLNLSFAGLEQVPKGLPAKLR---VLD 303
LDLSHN L PR + ++ + LNLS ++ +P L L LD
Sbjct: 109 ------LDLSHNQLT-----ECPRELENAKNMLVLNLSHNSIDTIPNQLFINLTDLLYLD 157
Query: 304 LSCNRLNRAP-QPDELPEVDNLTLDGNPFL 332
LS NRL P Q L + L L+GNP L
Sbjct: 158 LSENRLESLPPQMRRLVHLQTLVLNGNPLL 187
Score = 28.9 bits (63), Expect = 7.9
Identities = 63/242 (26%), Positives = 90/242 (37%), Gaps = 48/242 (19%)
Query: 124 EDLKITGTMPPLPLEATGL--------ALSSLRLRNVSWATGRSWLAELQQWLKPGLKVL 175
E++K ++ L L TGL AL L +VS + EL P L+ +
Sbjct: 27 ENVKAMTSLRWLKLNRTGLCYLPEELAALQKLEHLSVSHNNLTTLHGELSSL--PSLRAI 84
Query: 176 SIAQAHSPAFSC--EQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTG 233
+A+A+S S + + L+ LDLS N CP + +N+ + N
Sbjct: 85 -VARANSLKNSGVPDDIFKLDDLSVLDLSHN--------QLTECPRELENAKNMLVLNLS 135
Query: 234 METPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC--MWSSALNSLNLSFAGLEQV 291
+ + L LDLS N L + + P R + + LN L A L Q+
Sbjct: 136 HNSIDTIPNQLFINLTDLLYLDLSENRLES-LPPQMRRLVHLQTLVLNGNPLLHAQLRQL 194
Query: 292 P-----------------KGLPAKLRVL------DLSCNRLNRAPQ-PDELPEVDNLTLD 327
P LP L L DLSCN L R P+ LP + L L
Sbjct: 195 PAMTALQTLHLRSTQRTQSNLPTSLEGLSNLADVDLSCNDLTRVPECLYTLPSLRRLNLS 254
Query: 328 GN 329
N
Sbjct: 255 SN 256
>gi|226342935 podocan-like 1 isoform 3 [Homo sapiens]
Length = 421
Score = 37.4 bits (85), Expect = 0.022
Identities = 66/232 (28%), Positives = 91/232 (39%), Gaps = 38/232 (16%)
Query: 104 QLLVGALRVLAYSRLKELTLEDL---KITGTMPPLPLEATGLALSSLRLRNVSWATGRSW 160
QL L +S+L L DL ++T LP L L R+R V A
Sbjct: 160 QLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPAGLPRTLAILHLGRNRIRQVEAARLHG- 218
Query: 161 LAELQQWLKPGLKVLSIA--QAHSPAFSCEQVRAFPALTSLDLSDN-----PGLGERGLM 213
GL+ L + Q S +R L +L L N P R L
Sbjct: 219 --------ARGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGNGLDRVPPALPRRLR 270
Query: 214 AALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLR-ATVNPSAPRC 272
A + PH A G +A G+ L+L++N L A V+ A R
Sbjct: 271 ALVLPHNHVAA-------------LGARDLVATPGLT--ELNLAYNRLASARVHHRAFRR 315
Query: 273 MWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAPQPDELPEVDNL 324
+ AL SL+L+ L ++P GLP LR L L N+L R +P+ L +D L
Sbjct: 316 L--RALRSLDLAGNQLTRLPMGLPTGLRTLQLQRNQL-RMLEPEPLAGLDQL 364
>gi|226342933 podocan-like 1 isoform 2 [Homo sapiens]
Length = 510
Score = 37.4 bits (85), Expect = 0.022
Identities = 66/232 (28%), Positives = 91/232 (39%), Gaps = 38/232 (16%)
Query: 104 QLLVGALRVLAYSRLKELTLEDL---KITGTMPPLPLEATGLALSSLRLRNVSWATGRSW 160
QL L +S+L L DL ++T LP L L R+R V A
Sbjct: 249 QLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPAGLPRTLAILHLGRNRIRQVEAARLHG- 307
Query: 161 LAELQQWLKPGLKVLSIA--QAHSPAFSCEQVRAFPALTSLDLSDN-----PGLGERGLM 213
GL+ L + Q S +R L +L L N P R L
Sbjct: 308 --------ARGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGNGLDRVPPALPRRLR 359
Query: 214 AALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLR-ATVNPSAPRC 272
A + PH A G +A G+ L+L++N L A V+ A R
Sbjct: 360 ALVLPHNHVAA-------------LGARDLVATPGLT--ELNLAYNRLASARVHHRAFRR 404
Query: 273 MWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAPQPDELPEVDNL 324
+ AL SL+L+ L ++P GLP LR L L N+L R +P+ L +D L
Sbjct: 405 L--RALRSLDLAGNQLTRLPMGLPTGLRTLQLQRNQL-RMLEPEPLAGLDQL 453
>gi|226342931 podocan-like 1 isoform 1 [Homo sapiens]
Length = 512
Score = 37.4 bits (85), Expect = 0.022
Identities = 66/232 (28%), Positives = 91/232 (39%), Gaps = 38/232 (16%)
Query: 104 QLLVGALRVLAYSRLKELTLEDL---KITGTMPPLPLEATGLALSSLRLRNVSWATGRSW 160
QL L +S+L L DL ++T LP L L R+R V A
Sbjct: 251 QLTDSGLDATTFSKLHSLEYLDLSHNQLTTVPAGLPRTLAILHLGRNRIRQVEAARLHG- 309
Query: 161 LAELQQWLKPGLKVLSIA--QAHSPAFSCEQVRAFPALTSLDLSDN-----PGLGERGLM 213
GL+ L + Q S +R L +L L N P R L
Sbjct: 310 --------ARGLRYLLLQHNQLGSSGLPAGALRPLRGLHTLHLYGNGLDRVPPALPRRLR 361
Query: 214 AALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLR-ATVNPSAPRC 272
A + PH A G +A G+ L+L++N L A V+ A R
Sbjct: 362 ALVLPHNHVAA-------------LGARDLVATPGLT--ELNLAYNRLASARVHHRAFRR 406
Query: 273 MWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAPQPDELPEVDNL 324
+ AL SL+L+ L ++P GLP LR L L N+L R +P+ L +D L
Sbjct: 407 L--RALRSLDLAGNQLTRLPMGLPTGLRTLQLQRNQL-RMLEPEPLAGLDQL 455
>gi|8394456 toll-like receptor 9 isoform A precursor [Homo sapiens]
Length = 1032
Score = 36.2 bits (82), Expect = 0.049
Identities = 54/161 (33%), Positives = 73/161 (45%), Gaps = 25/161 (15%)
Query: 191 RAFPALTSLDLSDNPGLGERGLMAALCP---HKFPAIQNLALRNTGMETPTGV-----CA 242
RAFP L +DLSDN G L A + + +Q L ++TP+ C+
Sbjct: 412 RAFPGLRYVDLSDNRISGASELTATMGEADGGEKVWLQPGDLAPAPVDTPSSEDFRPNCS 471
Query: 243 ALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKG---LP-AK 298
L +LDLS N+L TV P + S L L LS + Q G LP
Sbjct: 472 TL------NFTLDLSRNNL-VTVQPEMFAQL--SHLQCLRLSHNCISQAVNGSQFLPLTG 522
Query: 299 LRVLDLSCNRLNRAPQPD--ELPEVDNLTLDGN--PFLVPG 335
L+VLDLS N+L+ + ELP ++ L L N PF + G
Sbjct: 523 LQVLDLSHNKLDLYHEHSFTELPRLEALDLSYNSQPFGMQG 563
>gi|37221175 PH domain and leucine rich repeat protein phosphatase
[Homo sapiens]
Length = 1205
Score = 35.8 bits (81), Expect = 0.064
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 254 LDLSHNSLRA--TVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNR 311
+DLS N L+A T + R A ++ F + Q+P+ ++ +DLSCN L+
Sbjct: 553 IDLSGNKLKAIPTTIMNCRRMHTVIAHSNCIEVFPEVMQLPE-----IKCVDLSCNELSE 607
Query: 312 APQPDEL-PEVDNLTLDGNPFLV 333
P+ L P++ L L GNP LV
Sbjct: 608 VTLPENLPPKLQELDLTGNPRLV 630
>gi|54607118 leucine-rich repeats and immunoglobulin-like domains 1
[Homo sapiens]
Length = 1093
Score = 35.8 bits (81), Expect = 0.064
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 263 ATVNPSAP-RCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAPQP--DELP 319
A P AP + A +SL+ GL +P LP+ R L+LS N+L+ ++LP
Sbjct: 33 AAAGPRAPCAAACTCAGDSLDCGGRGLAALPGDLPSWTRSLNLSYNKLSEIDPAGFEDLP 92
Query: 320 EVDNLTLDGNPFLVPGTALPHEGSMNSGVV 349
+ + L+ N TA+P G+ +S VV
Sbjct: 93 NLQEVYLNNNEL----TAVPSLGAASSHVV 118
>gi|23097240 leucine-rich repeats and WD repeat domain containing 1
[Homo sapiens]
Length = 647
Score = 35.8 bits (81), Expect = 0.064
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 278 LNSLNLSFAGLEQVPKGLP-AKLRVLDLSCNRLNRAPQPDELPEVDNLTLDGNPFL 332
L L+LS LE +P L + LRVL + N+L + P+++ L+L+GNPFL
Sbjct: 49 LQELDLSNNHLETLPDNLGLSHLRVLRCANNQLGDVTALCQFPKLEELSLEGNPFL 104
>gi|4826876 osteomodulin [Homo sapiens]
Length = 421
Score = 35.0 bits (79), Expect = 0.11
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 278 LNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAPQP--DELPEVDNLTLDGN 329
L LNL LE +P GLP+ L L L N ++ P+ D+LP++ L + N
Sbjct: 214 LMQLNLCSNRLESMPPGLPSSLMYLSLENNSISSIPEKYFDKLPKLHTLRMSHN 267
>gi|38348406 leucine rich repeat containing 33 [Homo sapiens]
Length = 692
Score = 35.0 bits (79), Expect = 0.11
Identities = 47/147 (31%), Positives = 61/147 (41%), Gaps = 20/147 (13%)
Query: 195 ALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSL 254
ALT LDLS N L E L L + +L L N GV L A +L
Sbjct: 377 ALTELDLSHNQ-LSELHLAPGLAS----CLGSLRLFNLSSNQLLGVPPGLFANARNITTL 431
Query: 255 DLSHNSLRATVNPSA------PRCM---WSSALNSLNLSFAGLEQVP--KGLPAKLRVLD 303
D+SHN + P+A P C+ ++L SL+L GL +P L LD
Sbjct: 432 DMSHNQISLCPLPAASDRVGPPSCVDFRNMASLRSLSLEGCGLGALPDCPFQGTSLTYLD 491
Query: 304 LSCN----RLNRAPQPDELPEVDNLTL 326
LS N + AP D P + L+L
Sbjct: 492 LSSNWGVLNGSLAPLQDVAPMLQVLSL 518
>gi|193083139 leucine rich repeat containing 32 precursor [Homo
sapiens]
Length = 662
Score = 34.7 bits (78), Expect = 0.14
Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 33/228 (14%)
Query: 126 LKITGTMPP--LPLEATGLALSSLRLRNVSWATGRSWL---AELQQWLKPG-------LK 173
L++ +PP L+ +G L S+ + + T L +L+PG L+
Sbjct: 41 LQVPSVLPPDTETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLE 100
Query: 174 VLSIAQ---AHSPAFSCEQVRAFPALTSLDLSDNP---GLGERGLMAALCPHKFPAIQNL 227
LS+A A + A S + P +TSLDLS N GL ER L A P++ L
Sbjct: 101 HLSLAHNRLAMATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEA------PSLHTL 154
Query: 228 ALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAG 287
+L + T A Q LDL H+++ + A + L LNLS
Sbjct: 155 SLAENSLTRLTRHTFRDMPALEQ---LDL-HSNVLMDIEDGAFEGL--PRLTHLNLSRNS 208
Query: 288 LEQVPKGLPAKLRVLDLSCNRL---NRAPQPDELPEVDNLTLDGNPFL 332
L + +LRVLDLSCN + A QP ++ L L N L
Sbjct: 209 LTCISDFSLQQLRVLDLSCNSIEAFQTASQPQAEFQLTWLDLRENKLL 256
>gi|5031707 leucine rich repeat containing 32 precursor [Homo
sapiens]
Length = 662
Score = 34.7 bits (78), Expect = 0.14
Identities = 66/228 (28%), Positives = 95/228 (41%), Gaps = 33/228 (14%)
Query: 126 LKITGTMPP--LPLEATGLALSSLRLRNVSWATGRSWL---AELQQWLKPG-------LK 173
L++ +PP L+ +G L S+ + + T L +L+PG L+
Sbjct: 41 LQVPSVLPPDTETLDLSGNQLRSILASPLGFYTALRHLDLSTNEISFLQPGAFQALTHLE 100
Query: 174 VLSIAQ---AHSPAFSCEQVRAFPALTSLDLSDNP---GLGERGLMAALCPHKFPAIQNL 227
LS+A A + A S + P +TSLDLS N GL ER L A P++ L
Sbjct: 101 HLSLAHNRLAMATALSAGGLGPLPRVTSLDLSGNSLYSGLLERLLGEA------PSLHTL 154
Query: 228 ALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAG 287
+L + T A Q LDL H+++ + A + L LNLS
Sbjct: 155 SLAENSLTRLTRHTFRDMPALEQ---LDL-HSNVLMDIEDGAFEGL--PRLTHLNLSRNS 208
Query: 288 LEQVPKGLPAKLRVLDLSCNRL---NRAPQPDELPEVDNLTLDGNPFL 332
L + +LRVLDLSCN + A QP ++ L L N L
Sbjct: 209 LTCISDFSLQQLRVLDLSCNSIEAFQTASQPQAEFQLTWLDLRENKLL 256
>gi|46094076 tsukushin [Homo sapiens]
Length = 353
Score = 34.3 bits (77), Expect = 0.19
Identities = 59/208 (28%), Positives = 83/208 (39%), Gaps = 47/208 (22%)
Query: 134 PLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 193
P+PL+ L LSS RL V+ S LA PG L+ + AF
Sbjct: 55 PIPLDTAHLDLSSNRLEMVN----ESVLAG------PGYTTLAGLDLSHNLLTSISPTAF 104
Query: 194 PALT---SLDLSDNPGLGERGLMAALCPHKFPA--IQNLALRNTGMETPTGVCAALAAAG 248
L SLDLS N + AL F + + ++ L + + + + G
Sbjct: 105 SRLRYLESLDLSHNG-------LTALPAESFTSSPLSDVNLSHNQLREVSVSAFTTHSQG 157
Query: 249 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPA-KLRVLDLSCN 307
H +DLSHN + V P R GLPA ++ L+L+ N
Sbjct: 158 RALH-VDLSHNLIHRLV-PHPTRA---------------------GLPAPTIQSLNLAWN 194
Query: 308 RLNRAPQPDELPEVDNLTLDGNPFLVPG 335
RL+ P +LP + L+LDGNP V G
Sbjct: 195 RLHAVPNLRDLP-LRYLSLDGNPLAVIG 221
>gi|188536110 leucine rich repeat neuronal 4 [Homo sapiens]
Length = 740
Score = 34.3 bits (77), Expect = 0.19
Identities = 30/80 (37%), Positives = 33/80 (41%), Gaps = 3/80 (3%)
Query: 253 SLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRA 312
SLD SHN LRA L + A L P G PA L LDLS N+L
Sbjct: 79 SLDASHNLLRALSTSELGHLEQLQVLTLRHNRIAALRWGPGG-PAGLHTLDLSYNQLAAL 137
Query: 313 P--QPDELPEVDNLTLDGNP 330
P L + L L GNP
Sbjct: 138 PPCTGPALSSLRALALAGNP 157
>gi|50263044 leucine-rich repeat neuronal 6A [Homo sapiens]
Length = 620
Score = 33.9 bits (76), Expect = 0.24
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 250 QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRL 309
QP L + + L + PRC S+ ++ VP+G+P + R+LDL NR+
Sbjct: 24 QPILLLVLGSVLSGSATGCPPRCECSAQDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRI 83
Query: 310 NRAPQPD--ELPEVDNLTLDGN 329
Q + P ++ L L+ N
Sbjct: 84 KTLNQDEFASFPHLEELELNEN 105
>gi|52426787 oligodendrocyte myelin glycoprotein [Homo sapiens]
Length = 440
Score = 33.5 bits (75), Expect = 0.32
Identities = 21/49 (42%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 277 ALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAPQPDELPEVDNLT 325
+L LNLS L VP +P+KL ++DLS N L + P L + NLT
Sbjct: 147 SLEVLNLSSNKLWTVPTNMPSKLHIVDLSNNSLTQI-LPGTLINLTNLT 194
>gi|22749183 leucine rich repeat and Ig domain containing 2 [Homo
sapiens]
Length = 606
Score = 33.5 bits (75), Expect = 0.32
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 271 RCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAPQPDEL---PEVDNLTLD 327
RC S+ S++ L +P+G+P + ++LDLS NRL ++ P+E P ++ + L
Sbjct: 31 RCECSAQNKSVSCHRRRLIAIPEGIPIETKILDLSKNRL-KSVNPEEFISYPLLEEIDLS 89
Query: 328 GN 329
N
Sbjct: 90 DN 91
>gi|10190722 leucine-rich repeats and transmembrane domains 1 [Homo
sapiens]
Length = 345
Score = 33.5 bits (75), Expect = 0.32
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 13/104 (12%)
Query: 161 LAELQQWLKPGLKVLSIAQA---HSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALC 217
LAE+ L P + L + H PAF+ R+ P L +L+LS+N ++ L
Sbjct: 41 LAEIPSHLPPQTRTLHLQDNQIHHLPAFA---FRSVPWLMTLNLSNNS-------LSNLA 90
Query: 218 PHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSL 261
P F +Q+L + N + + + L + Q LDLS N++
Sbjct: 91 PGAFHGLQHLQVLNLTQNSLLSLESRLFHSLPQLRELDLSSNNI 134
>gi|110825984 malignant fibrous histiocytoma amplified sequence 1
[Homo sapiens]
Length = 1052
Score = 33.1 bits (74), Expect = 0.42
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 12/76 (15%)
Query: 244 LAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALN---SLNLSFAGLEQVPKGLPA--- 297
L AAG P + A +P++P+ + + L +LNL GLE+VP+GL +
Sbjct: 34 LTAAGACPGA------GADALESPASPQLVLPANLGDIEALNLGNNGLEEVPEGLGSALG 87
Query: 298 KLRVLDLSCNRLNRAP 313
LRVL L NR R P
Sbjct: 88 SLRVLVLRRNRFARLP 103
>gi|45505137 podocan [Homo sapiens]
Length = 661
Score = 33.1 bits (74), Expect = 0.42
Identities = 47/169 (27%), Positives = 65/169 (38%), Gaps = 29/169 (17%)
Query: 175 LSIAQAHSPAFSCEQVRAFPALTSLDLSDN------PGLGERGLMAALCPHKFPAIQNLA 228
LS + SP + R L SLDLS N PGL + + ++ A+ A
Sbjct: 459 LSYNRITSPQVHRDAFRKLRLLRSLDLSGNRLHTLPPGLPRNVHVLKVKRNELAALARGA 518
Query: 229 LRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAG- 287
L GM Q L L+ N LR+ PR W + L AG
Sbjct: 519 L--VGM--------------AQLRELYLTSNRLRSRA--LGPRA-WVDLAHLQLLDIAGN 559
Query: 288 -LEQVPKGLPAKLRVLDLSCNRLNRAPQP--DELPEVDNLTLDGNPFLV 333
L ++P+GLP L L L N+++ P D P + + L N V
Sbjct: 560 QLTEIPEGLPESLEYLYLQNNKISAVPANAFDSTPNLKGIFLRFNKLAV 608
Score = 32.7 bits (73), Expect = 0.55
Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 219 HKFPAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS-S 276
H PA+ L L+N +E P G + L++ L L +N L T W S
Sbjct: 283 HLPPALYKLHLKNNKLEKIPPGAFSELSSL----RELYLQNNYL--TDEGLDNETFWKLS 336
Query: 277 ALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRL 309
+L L+LS L +VP GLP L +L L N +
Sbjct: 337 SLEYLDLSSNNLSRVPAGLPRSLVLLHLEKNAI 369
>gi|239582714 leucine rich repeat containing 17 isoform 2 [Homo
sapiens]
Length = 313
Score = 32.7 bits (73), Expect = 0.55
Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 278 LNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAPQPDELPEVD-----NLTLDGNPFL 332
+ +L+ L++VP +P + LDLS N++N+ +P E +V NL+ +G F+
Sbjct: 249 IQTLDCKRKELKKVPNNIPPDIVKLDLSYNKINQL-RPKEFEDVHELKKLNLSSNGIEFI 307
Query: 333 VPGT 336
PG+
Sbjct: 308 DPGS 311
>gi|4505047 lumican precursor [Homo sapiens]
Length = 338
Score = 32.7 bits (73), Expect = 0.55
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 254 LDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAP 313
+ L HN L+ +A + + S L L+LSF + ++P GLP L L L N+++ P
Sbjct: 164 IHLQHNRLKEDAVSAAFKGLKS--LEYLDLSFNQIARLPSGLPVSLLTLYLDNNKISNIP 221
>gi|157694513 leucine-rich repeat-containing G protein-coupled
receptor 4 [Homo sapiens]
Length = 951
Score = 32.3 bits (72), Expect = 0.71
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 281 LNLSFAGLEQVPKGLPAKLRVLDLSCNRLNRAPQP--DELPEVDNLTLDGN 329
++ S GL VP+GL A + LD+S N + + P+ P ++ L L GN
Sbjct: 41 VDCSGKGLTAVPEGLSAFTQALDISMNNITQLPEDAFKNFPFLEELQLAGN 91
>gi|157426829 leucine rich repeat and Ig domain containing 3 [Homo
sapiens]
Length = 592
Score = 32.3 bits (72), Expect = 0.71
Identities = 26/81 (32%), Positives = 40/81 (49%), Gaps = 12/81 (14%)
Query: 260 SLRATVNPSAP--------RCMWSSALNSLNLSFAGLEQVPKGLPAKLRVLDLSCNRLNR 311
SL + P+AP RC + ++ + L VP G+PA+ R+L+LS NR+ R
Sbjct: 9 SLPLLLLPAAPPPAGGCPARCECTVQTRAVACTRRRLTAVPDGIPAETRLLELSRNRI-R 67
Query: 312 APQPDE---LPEVDNLTLDGN 329
P + LP ++ L L N
Sbjct: 68 CLNPGDLAALPALEELDLSEN 88
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,506,167
Number of Sequences: 37866
Number of extensions: 731740
Number of successful extensions: 1806
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 1695
Number of HSP's gapped (non-prelim): 157
length of query: 375
length of database: 18,247,518
effective HSP length: 104
effective length of query: 271
effective length of database: 14,309,454
effective search space: 3877862034
effective search space used: 3877862034
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.