| Name: LUM | Sequence: fasta or formatted (338aa) | NCBI GI: 4505047 | |
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Description: lumican precursor
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 3.6 12 2 C cysteine 1.8 6 1 D aspartate 5.0 17 1 E glutamate 6.2 21 1 F phenylalanine 4.1 14 1 G glycine 4.4 15 2 H histidine 2.7 9 1 I isoleucine 5.6 19 1 K lysine 7.4 25 2 L leucine 16.3 55 2 M methionine 1.2 4 1 N asparagine 8.9 30 2 P proline 5.3 18 2 Q glutamine 3.0 10 1 R arginine 2.7 9 1 S serine 9.2 31 2 T threonine 3.3 11 1 V valine 4.1 14 1 W tryptophan 0.3 1 1 Y tyrosine 5.0 17 2 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 lumican precursor FMOD 0.433 fibromodulin precursor PRELP 0.324 proline arginine-rich end leucine-rich repeat protei... PRELP 0.324 proline arginine-rich end leucine-rich repeat protein... OMD 0.321 osteomodulin KERA 0.321 keratocan ASPN 0.185 asporin DCN 0.170 decorin isoform a preproprotein DCN 0.170 decorin isoform a preproprotein BGN 0.157 biglycan preproprotein PODNL1 0.150 podocan-like 1 isoform 2 PODNL1 0.150 podocan-like 1 isoform 1 ECM2 0.149 extracellular matrix protein 2 precursor PODNL1 0.125 podocan-like 1 isoform 3 PODN 0.122 podocan CHAD 0.122 chondroadherin precursor LRRTM2 0.112 leucine rich repeat transmembrane neuronal 2 FLRT1 0.112 fibronectin leucine rich transmembrane protein 1 [Ho... LRRTM4 0.111 leucine rich repeat transmembrane neuronal 4 isofor... LRRTM4 0.111 leucine rich repeat transmembrane neuronal 4 isofor... FLRT2 0.111 fibronectin leucine rich transmembrane protein 2 [Hom... LRRTM1 0.108 leucine rich repeat transmembrane neuronal 1 FLRT3 0.108 fibronectin leucine rich transmembrane protein 3 pre... FLRT3 0.108 fibronectin leucine rich transmembrane protein 3 prec... LRRTM3 0.105 leucine rich repeat transmembrane neuronal 3 EPYC 0.102 dermatan sulfate proteoglycan 3 precursor LRRC70 0.099 synleurin OGN 0.094 osteoglycin preproprotein OGN 0.094 osteoglycin preproprotein LGR5 0.093 leucine-rich repeat-containing G protein-coupled rece...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
