Guide to the Human Genome
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Name: FLII Sequence: fasta or formatted (1269aa) NCBI GI: 4503743
Description:

flightless I homolog

Referenced in:

Cytoskeleton
Leucine-rich Repeat Family
Muscle

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         85           6
 C cysteine            2.0         26           1
 D aspartate           5.5         70           3
 E glutamate           8.7        110           4
 F phenylalanine       4.2         53           2
 G glycine             5.4         68           2
 H histidine           2.0         26           1
 I isoleucine          3.3         42           2
 K lysine              6.7         85           2
 L leucine            12.8        162           2
 M methionine          2.0         26           1
 N asparagine          4.8         61           3
 P proline             4.6         59           2
 Q glutamine           4.7         60           3
 R arginine            5.7         72           3
 S serine              6.1         77           2
 T threonine           4.6         58           2
 V valine              5.7         72           2
 W tryptophan          1.7         21           1
 Y tyrosine            2.8         36           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   flightless I homolog 
SCIN                  0.100   scinderin isoform 1 
AVIL                  0.100   advillin 
VIL1                  0.096   villin 1 
GSN                   0.092   gelsolin isoform a precursor 
GSN                   0.092   gelsolin isoform b 
GSN                   0.092   gelsolin isoform c 
GSN                   0.092   gelsolin isoform c 
GSN                   0.092   gelsolin isoform b 
GSN                   0.092   gelsolin isoform b 
GSN                   0.092   gelsolin isoform b 
GSN                   0.092   gelsolin isoform b 
VILL                  0.061   villin-like protein 
SCIN                  0.057   scinderin isoform 2 
SHOC2                 0.051   soc-2 suppressor of clear homolog 
CAPG                  0.048   gelsolin-like capping protein 
LRRIQ4                0.048   leucine-rich repeats and IQ motif containing 4 [Hom...
LOC401387             0.047   leucine-rich repeat and death domain-containing pro...
LRRC1                 0.046   leucine rich repeat containing 1 
MFHAS1                0.042   malignant fibrous histiocytoma amplified sequence 1...
ERBB2IP               0.042   ERBB2 interacting protein isoform 7 
ERBB2IP               0.042   ERBB2 interacting protein isoform 2 
LRRC7                 0.041   leucine rich repeat containing 7 
SCRIB                 0.040   scribble isoform b 
SCRIB                 0.040   scribble isoform a 
LRRC40                0.035   leucine rich repeat containing 40 
LRRC8B                0.034   leucine rich repeat containing 8 family, member B [...
LRRC8B                0.034   leucine rich repeat containing 8 family, member B [H...
LRDD                  0.033   leucine rich repeat and death domain containing prot...
LRDD                  0.033   leucine rich repeat and death domain containing prot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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