TSKU 30132

Name: TSKU	Sequence: fasta or formatted (353aa)		NCBI GI: 46094076
Description: tsukushin		Referenced in: Leucine-rich Repeat Family
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.4 26 2 C cysteine 1.7 6 1 D aspartate 4.2 15 1 E glutamate 3.7 13 1 F phenylalanine 2.8 10 1 G glycine 7.6 27 2 H histidine 4.0 14 1 I isoleucine 2.0 7 1 K lysine 0.6 2 1 L leucine 19.0 67 5 M methionine 0.8 3 1 N asparagine 4.0 14 1 P proline 8.8 31 1 Q glutamine 2.8 10 1 R arginine 6.2 22 2 S serine 10.5 37 2 T threonine 5.7 20 2 V valine 6.2 22 1 W tryptophan 0.8 3 1 Y tyrosine 1.1 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 tsukushin LRRN2 0.119 leucine rich repeat neuronal 2 LRRN2 0.119 leucine rich repeat neuronal 2 VASN 0.104 slit-like 2 LGR5 0.097 leucine-rich repeat-containing G protein-coupled rece... LGR4 0.092 leucine-rich repeat-containing G protein-coupled re... LRRC32 0.091 leucine rich repeat containing 32 precursor LRRC32 0.091 leucine rich repeat containing 32 precursor LRRN3 0.091 leucine rich repeat neuronal 3 LRRN3 0.091 leucine rich repeat neuronal 3 LRRN3 0.091 leucine rich repeat neuronal 3 LRG1 0.088 leucine-rich alpha-2-glycoprotein 1 PODNL1 0.087 podocan-like 1 isoform 3 ASPN 0.084 asporin GP5 0.084 glycoprotein V (platelet) CHADL 0.084 chondroadherin-like KIAA0644 0.084 hypothetical protein LOC9865 LRRC4B 0.082 leucine rich repeat containing 4B TLR3 0.082 toll-like receptor 3 IGFALS 0.081 insulin-like growth factor binding protein, acid la... IGFALS 0.081 insulin-like growth factor binding protein, acid labi... LGR6 0.081 leucine-rich repeat-containing G protein-coupled rec... LRRC15 0.081 leucine rich repeat containing 15 isoform a LRRC15 0.081 leucine rich repeat containing 15 isoform b PODNL1 0.079 podocan-like 1 isoform 2 PODNL1 0.079 podocan-like 1 isoform 1 LRIG2 0.078 leucine-rich repeats and immunoglobulin-like domains ... LINGO2 0.076 leucine rich repeat and Ig domain containing 2 [Homo... CPN2 0.076 carboxypeptidase N, polypeptide 2, 83kD LRIG3 0.076 leucine-rich repeats and immunoglobulin-like domains... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.