Guide to the Human Genome
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Name: CD14 Sequence: fasta or formatted (375aa) NCBI GI: 4557417
Description:

CD14 antigen precursor

Referenced in:

Macrophages and Monocytes
Toll-like Receptors

Other entries for this name:
alt mRNA [375aa] CD14 antigen precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.5         43           3
 C cysteine            2.9         11           1
 D aspartate           4.3         16           2
 E glutamate           5.3         20           1
 F phenylalanine       2.7         10           1
 G glycine             6.4         24           2
 H histidine           1.9          7           1
 I isoleucine          1.1          4           1
 K lysine              2.4          9           1
 L leucine            16.5         62           6
 M methionine          1.6          6           1
 N asparagine          4.0         15           1
 P proline             8.0         30           2
 Q glutamine           3.7         14           2
 R arginine            5.9         22           2
 S serine              7.7         29           2
 T threonine           4.8         18           2
 V valine              7.5         28           2
 W tryptophan          1.3          5           1
 Y tyrosine            0.5          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD14 antigen precursor 
CD14                  1.000   CD14 antigen precursor 
TLR2                  0.028   toll-like receptor 2 
TLR1                  0.025   toll-like receptor 1 
CHADL                 0.021   chondroadherin-like 
VASN                  0.019   slit-like 2 
FLII                  0.018   flightless I homolog 
PODNL1                0.017   podocan-like 1 isoform 3 
PODNL1                0.017   podocan-like 1 isoform 2 
PODNL1                0.017   podocan-like 1 isoform 1 
TLR9                  0.015   toll-like receptor 9 isoform A precursor 
PHLPP1                0.015   PH domain and leucine rich repeat protein phosphatas...
LRIG1                 0.015   leucine-rich repeats and immunoglobulin-like domains...
LRWD1                 0.015   leucine-rich repeats and WD repeat domain containing...
OMD                   0.014   osteomodulin 
LRRC33                0.014   leucine rich repeat containing 33 
LRRC32                0.014   leucine rich repeat containing 32 precursor 
LRRC32                0.014   leucine rich repeat containing 32 precursor 
TSKU                  0.012   tsukushin 
LRRN4                 0.012   leucine rich repeat neuronal 4 
LINGO1                0.012   leucine-rich repeat neuronal 6A 
OMG                   0.011   oligodendrocyte myelin glycoprotein 
LINGO2                0.011   leucine rich repeat and Ig domain containing 2 [Homo...
LRTM1                 0.011   leucine-rich repeats and transmembrane domains 1 [Ho...
MFHAS1                0.011   malignant fibrous histiocytoma amplified sequence 1...
PODN                  0.011   podocan 
LRRC17                0.011   leucine rich repeat containing 17 isoform 2 
LUM                   0.011   lumican precursor 
LGR4                  0.010   leucine-rich repeat-containing G protein-coupled re...
LINGO3                0.010   leucine rich repeat and Ig domain containing 3 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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