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Search of human proteins with 89363028
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|89363028 tubulin tyrosine ligase-like family, member 11 b
[Homo sapiens]
(538 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Ho... 1084 0.0
gi|212720861 tubulin tyrosine ligase-like family, member 11 a [H... 1037 0.0
gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo... 190 2e-48
gi|195963418 tubulin tyrosine ligase-like family, member 6 isofo... 182 7e-46
gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo ... 171 1e-42
gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo ... 133 4e-31
gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo... 132 6e-31
gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo ... 110 2e-24
gi|11068135 tubulin tyrosine ligase-like family, member 1 [Homo ... 100 3e-21
gi|24308516 tubulin tyrosine ligase [Homo sapiens] 67 5e-11
gi|109134340 tubulin tyrosine ligase-like family, member 3 [Homo... 57 3e-08
gi|73476377 LBXCOR1 homolog [Homo sapiens] 52 2e-06
gi|56606131 tubulin tyrosine ligase-like family, member 9 [Homo ... 51 3e-06
gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens] 47 3e-05
gi|194239681 tubulin tyrosine ligase-like family, member 10 isof... 47 6e-05
gi|194239678 tubulin tyrosine ligase-like family, member 10 isof... 47 6e-05
gi|4506975 solute carrier family 12 (sodium/potassium/chloride t... 44 3e-04
gi|45439359 triple functional domain (PTPRF interacting) [Homo s... 44 4e-04
gi|11056036 tubulin tyrosine ligase-like family, member 12 [Homo... 44 4e-04
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 43 6e-04
gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo... 42 0.001
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens] 41 0.002
gi|19111150 angiomotin isoform 2 [Homo sapiens] 41 0.003
gi|166064029 angiomotin isoform 1 [Homo sapiens] 41 0.003
gi|239755810 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|239750310 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|239744621 PREDICTED: hypothetical protein [Homo sapiens] 40 0.005
gi|24497554 homeobox A13 [Homo sapiens] 40 0.007
gi|210032509 hypothetical protein LOC100130302 [Homo sapiens] 40 0.007
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 39 0.009
>gi|89363028 tubulin tyrosine ligase-like family, member 11 b [Homo
sapiens]
Length = 538
Score = 1084 bits (2803), Expect = 0.0
Identities = 538/538 (100%), Positives = 538/538 (100%)
Query: 1 MAAAASVTGRVTWAASPMRSLGLGRRLSLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSG 60
MAAAASVTGRVTWAASPMRSLGLGRRLSLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSG
Sbjct: 1 MAAAASVTGRVTWAASPMRSLGLGRRLSLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSG 60
Query: 61 CSGGSLVADWGGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEA 120
CSGGSLVADWGGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEA
Sbjct: 61 CSGGSLVADWGGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEA 120
Query: 121 EATAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPP 180
EATAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPP
Sbjct: 121 EATAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPP 180
Query: 181 SKPKPVQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPVTVDSSKARTSLDALKISIRQL 240
SKPKPVQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPVTVDSSKARTSLDALKISIRQL
Sbjct: 181 SKPKPVQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPVTVDSSKARTSLDALKISIRQL 240
Query: 241 KWKEFPFGRRLPCDIYWHGVSFHDNDIFSGQVNKFPGMTEMVRKITLSRAVRTMQNLFPE 300
KWKEFPFGRRLPCDIYWHGVSFHDNDIFSGQVNKFPGMTEMVRKITLSRAVRTMQNLFPE
Sbjct: 241 KWKEFPFGRRLPCDIYWHGVSFHDNDIFSGQVNKFPGMTEMVRKITLSRAVRTMQNLFPE 300
Query: 301 EYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDIRL 360
EYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDIRL
Sbjct: 301 EYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDIRL 360
Query: 361 AGTLQSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEP 420
AGTLQSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEP
Sbjct: 361 AGTLQSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEP 420
Query: 421 TPKNLHRIFMHLTNYSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSKGVDIKKVWSDII 480
TPKNLHRIFMHLTNYSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSKGVDIKKVWSDII
Sbjct: 421 TPKNLHRIFMHLTNYSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSKGVDIKKVWSDII 480
Query: 481 SVVIKTVIALTPELKVFYQSDIPTGRPGPTCFQVTIASSQPAFPALTGLKRALWLRVG 538
SVVIKTVIALTPELKVFYQSDIPTGRPGPTCFQVTIASSQPAFPALTGLKRALWLRVG
Sbjct: 481 SVVIKTVIALTPELKVFYQSDIPTGRPGPTCFQVTIASSQPAFPALTGLKRALWLRVG 538
>gi|212720861 tubulin tyrosine ligase-like family, member 11 a [Homo
sapiens]
Length = 800
Score = 1037 bits (2681), Expect = 0.0
Identities = 513/514 (99%), Positives = 514/514 (100%)
Query: 1 MAAAASVTGRVTWAASPMRSLGLGRRLSLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSG 60
MAAAASVTGRVTWAASPMRSLGLGRRLSLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSG
Sbjct: 1 MAAAASVTGRVTWAASPMRSLGLGRRLSLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSG 60
Query: 61 CSGGSLVADWGGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEA 120
CSGGSLVADWGGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEA
Sbjct: 61 CSGGSLVADWGGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEA 120
Query: 121 EATAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPP 180
EATAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPP
Sbjct: 121 EATAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPP 180
Query: 181 SKPKPVQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPVTVDSSKARTSLDALKISIRQL 240
SKPKPVQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPVTVDSSKARTSLDALKISIRQL
Sbjct: 181 SKPKPVQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPVTVDSSKARTSLDALKISIRQL 240
Query: 241 KWKEFPFGRRLPCDIYWHGVSFHDNDIFSGQVNKFPGMTEMVRKITLSRAVRTMQNLFPE 300
KWKEFPFGRRLPCDIYWHGVSFHDNDIFSGQVNKFPGMTEMVRKITLSRAVRTMQNLFPE
Sbjct: 241 KWKEFPFGRRLPCDIYWHGVSFHDNDIFSGQVNKFPGMTEMVRKITLSRAVRTMQNLFPE 300
Query: 301 EYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDIRL 360
EYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDIRL
Sbjct: 301 EYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDIRL 360
Query: 361 AGTLQSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEP 420
AGTLQSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEP
Sbjct: 361 AGTLQSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEP 420
Query: 421 TPKNLHRIFMHLTNYSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSKGVDIKKVWSDII 480
TPKNLHRIFMHLTNYSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSKGVDIKKVWSDII
Sbjct: 421 TPKNLHRIFMHLTNYSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSKGVDIKKVWSDII 480
Query: 481 SVVIKTVIALTPELKVFYQSDIPTGRPGPTCFQV 514
SVVIKTVIALTPELKVFYQSDIPTGRPGPTCFQ+
Sbjct: 481 SVVIKTVIALTPELKVFYQSDIPTGRPGPTCFQI 514
>gi|75677580 tubulin tyrosine ligase-like family, member 13 [Homo
sapiens]
Length = 459
Score = 190 bits (483), Expect = 2e-48
Identities = 98/241 (40%), Positives = 145/241 (60%), Gaps = 13/241 (5%)
Query: 271 QVNKFPGMTEMVRKITLSRAVRTMQNLFPEEYNFYPRSWILPDEFQLFVAQVQMVKDDDP 330
++N FPGMTE+ RK L+R + M L+P EYN +PR+W LP ++ F + + K
Sbjct: 140 KINHFPGMTEICRKDLLARNLNRMYKLYPSEYNIFPRTWCLPADYGDFQSYGRQRK---- 195
Query: 331 SWKPTFIVKPDGGCQGDGIYLIKDPSDIRLAGTLQSRPAVVQEYICKPLLIDKLKFDIRL 390
T+I KPD GCQG GI++ ++P +I+ + Q+YI KPLLID KFD+R+
Sbjct: 196 --ARTYICKPDSGCQGRGIFITRNPREIK-----PGEHMICQQYISKPLLIDGFKFDMRV 248
Query: 391 YVLLKSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLHRIFMHLTNYSLNIHSGNFIHSDSA 450
YVL+ S DPL I+ ++GL+RF T PY EP+ NL + MHLTNY++N H+ NF+
Sbjct: 249 YVLITSCDPLRIFTYEEGLARFATTPYMEPSHNNLDNVCMHLTNYAINKHNENFVR--DG 306
Query: 451 STGSKRTFSSILCRLSSKGVDIKKVWSDIISVVIKTVIALTPELKVFYQSDIPTGRPGPT 510
+ GSKR S++ L + ++W DI ++IKT+I+ L+ Y++ P G T
Sbjct: 307 AVGSKRKLSTLNIWLQEHSYNPGELWGDIEDIIIKTIISAHSVLRHNYRTCFPQYLNGGT 366
Query: 511 C 511
C
Sbjct: 367 C 367
>gi|195963418 tubulin tyrosine ligase-like family, member 6 isoform
1 [Homo sapiens]
Length = 891
Score = 182 bits (462), Expect = 7e-46
Identities = 94/244 (38%), Positives = 141/244 (57%), Gaps = 13/244 (5%)
Query: 271 QVNKFPGMTEMVRKITLSRAVRTMQNLFPEEYNFYPRSWILPDEFQLFVAQVQMVKDDDP 330
++N FPGM+E+ RK L+R + M +FP+++ F+PR+W LP ++ + K+
Sbjct: 161 KINHFPGMSEICRKDLLARNMSRMLKMFPKDFRFFPRTWCLPADWGDLQTYSRSRKNK-- 218
Query: 331 SWKPTFIVKPDGGCQGDGIYLIKDPSDIRLAGTLQSRPAVVQEYICKPLLIDKLKFDIRL 390
T+I KPD GCQG GI++ + +I+ + Q YI KP +ID KFD+R+
Sbjct: 219 ----TYICKPDSGCQGKGIFITRTVKEIK-----PGEDMICQLYISKPFIIDGFKFDLRI 269
Query: 391 YVLLKSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLHRIFMHLTNYSLNIHSGNFIHSDSA 450
YVL+ S DPL I++ +GL+RF T Y P NL I MHLTNYS+N HS NF S A
Sbjct: 270 YVLVTSCDPLRIFVYNEGLARFATTSYSRPCTDNLDDICMHLTNYSINKHSSNF--SRDA 327
Query: 451 STGSKRTFSSILCRLSSKGVDIKKVWSDIISVVIKTVIALTPELKVFYQSDIPTGRPGPT 510
+GSKR S+ L +++++W DI V+IKT+I+ P ++ Y + P
Sbjct: 328 HSGSKRKLSTFSAYLEDHSYNVEQIWRDIEDVIIKTLISAHPIIRHNYHTCFPNHTLNSA 387
Query: 511 CFQV 514
CF++
Sbjct: 388 CFEI 391
>gi|94536793 tubulin tyrosine ligase-like family, member 7 [Homo
sapiens]
Length = 887
Score = 171 bits (434), Expect = 1e-42
Identities = 111/336 (33%), Positives = 170/336 (50%), Gaps = 14/336 (4%)
Query: 185 PVQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPVTVDSSKARTSLDALKISIRQLKWKE 244
P +G+ P D S ++ T+ ++ A T + +++ I ++ + +
Sbjct: 5 PQEGVIQGPSPLDLNTELPYQSTMKRKVRKKKKKGTITANVAGTKFEIVRLVIDEMGFMK 64
Query: 245 FPFGRRLPCDIYWHGVSFHDNDIFSGQ----VNKFPGMTEMVRKITLSRAVRTMQNLFPE 300
P ++ W + I Q +N FPGM E+ RK L+R + M P
Sbjct: 65 TP-DEDETSNLIWCDSAVQQEKISELQNYQRINHFPGMGEICRKDFLARNMTKMIKSRPL 123
Query: 301 EYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDIRL 360
+Y F PR+WI P E+ F V+ +K + TFIVKP G G GI LI++ +
Sbjct: 124 DYTFVPRTWIFPAEYTQFQNYVKELKKKRK--QKTFIVKPANGAMGHGISLIRNGDKLPS 181
Query: 361 AGTLQSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEP 420
L +VQEYI KP L++ KFD+R+Y+L+ S DPL+I++ DGL R TE Y P
Sbjct: 182 QDHL-----IVQEYIEKPFLMEGYKFDLRIYILVTSCDPLKIFLYHDGLVRMGTEKYIPP 236
Query: 421 TPKNLHRIFMHLTNYSLNIHSGNFIHSDSASTGSKRTFSSILCRLSSKGVDIKKVWSDII 480
NL +++MHLTNYS+N H+ +F ++ + GSKR+ L + D+ K WSDI
Sbjct: 237 NESNLTQLYMHLTNYSVNKHNEHFERDETENKGSKRSIKWFTEFLQANQHDVAKFWSDIS 296
Query: 481 SVVIKTVIALTPELKVFYQSDIPTGRPG--PTCFQV 514
+V+KT+I P + Y+ P PG CF+V
Sbjct: 297 ELVVKTLIVAEPHVLHAYRMCRPGQPPGSESVCFEV 332
>gi|50658079 tubulin tyrosine ligase-like family, member 5 [Homo
sapiens]
Length = 1281
Score = 133 bits (335), Expect = 4e-31
Identities = 83/223 (37%), Positives = 127/223 (56%), Gaps = 17/223 (7%)
Query: 271 QVNKFPGMTEMVRKITLSRAVRTMQNLFP-EEYNFYPRSWILPDEFQLFVAQVQMVKDDD 329
+VN FP E+ RK L + + MQ+ + ++ P++++LP E+ F KD
Sbjct: 118 KVNHFPRSYELTRKDRLYKNIIRMQHTHGFKAFHILPQTFLLPAEYAEFCNSYS--KDRG 175
Query: 330 PSWKPTFIVKPDGGCQGDGIYLIKDPSDIRLAGTLQSRPAVVQEYICKPLLIDKLKFDIR 389
P +IVKP +G G+YLI +P+ I L + +V YI PLLID KFD+R
Sbjct: 176 P-----WIVKPVASSRGRGVYLINNPNQISLEENI-----LVSRYINNPLLIDDFKFDVR 225
Query: 390 LYVLLKSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLHRIFMHLTNYSLNIHSGNFIHSDS 449
LYVL+ S DPL IY+ ++GL+RF T Y + KN+ FMHLTNYS+N SG+++ D
Sbjct: 226 LYVLVTSYDPLVIYLYEEGLARFATVRYDQGA-KNIRNQFMHLTNYSVNKKSGDYVSCDD 284
Query: 450 AST---GSKRTFSSILCRLSSKGVDIKKVWSDIISVVIKTVIA 489
G+K + S++L L +G D + + + ++IKT+I+
Sbjct: 285 PEVEDYGNKWSMSAMLRYLKQEGRDTTALMAHVEDLIIKTIIS 327
>gi|217330594 tubulin tyrosine ligase-like family, member 4 [Homo
sapiens]
Length = 1199
Score = 132 bits (333), Expect = 6e-31
Identities = 85/225 (37%), Positives = 128/225 (56%), Gaps = 15/225 (6%)
Query: 271 QVNKFPGMTEMVRKITLSRAVRTMQNLF-PEEYNFYPRSWILPDEFQLFVAQVQMVKDDD 329
++N FPG ++ RK L R + MQ+ F +E++F+P+S+ILP + +L + K +
Sbjct: 658 KLNHFPGSFQIGRKDRLWRNLSRMQSRFGKKEFSFFPQSFILPQDAKL------LRKAWE 711
Query: 330 PSWKPTFIVKPDGGCQGDGIYLIKDPSDIRLAGTLQSRPAVVQEYICKPLLIDKLKFDIR 389
S + +IVKP +G GI +I S + + RP +VQ Y+ KP LI KFD+R
Sbjct: 712 SSSRQKWIVKPPASARGIGIQVIHKWSQLP-----KRRPLLVQRYLHKPYLISGSKFDLR 766
Query: 390 LYVLLKSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLHRIFMHLTNYSLNIHSGNFIHS-- 447
+YV + S DPL IY+ DGL RF + Y P+ K+L FMHLTNYS+N + + +
Sbjct: 767 IYVYVTSYDPLRIYLFSDGLVRFASCKY-SPSMKSLGNKFMHLTNYSVNKKNAEYQANAD 825
Query: 448 DSASTGSKRTFSSILCRLSSKGVDIKKVWSDIISVVIKTVIALTP 492
+ A G K ++ LS KGV+ +W I VV+KT+I+ P
Sbjct: 826 EMACQGHKWALKALWNYLSQKGVNSDAIWEKIKDVVVKTIISSEP 870
>gi|99028883 tubulin tyrosine ligase-like family, member 2 [Homo
sapiens]
Length = 592
Score = 110 bits (276), Expect = 2e-24
Identities = 78/251 (31%), Positives = 124/251 (49%), Gaps = 22/251 (8%)
Query: 254 DIYWHGVSFHDNDIFS----GQVNKFPGMTEMVRKITLSRAVRTMQNLFPEE-YNFYPRS 308
++YW SF + S Q+N PG T++ RK L++ ++ M+ ++ Y F P +
Sbjct: 122 NLYWRTSSFRMTEHNSVKPWQQLNHHPGTTKLTRKDCLAKHLKHMRRMYGTSLYQFIPLT 181
Query: 309 WILPDEFQLFVAQV----QMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDIRLAGTL 364
+++P+++ FVA+ QM+ W I KP +G GI + D D +
Sbjct: 182 FVMPNDYTKFVAEYFQERQMLGTKHSYW----ICKPAELSRGRGILIFSDFKDF-----I 232
Query: 365 QSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEPTPKN 424
+VQ+YI PLLI + K D+R+YV + PL IY+ ++GL RF TE + N
Sbjct: 233 FDDMYIVQKYISNPLLIGRYKCDLRIYVCVTGFKPLTIYVYQEGLVRFATEKFD---LSN 289
Query: 425 LHRIFMHLTNYSLNIHSGNFIH-SDSASTGSKRTFSSILCRLSSKGVDIKKVWSDIISVV 483
L + HLTN S+N ++ + G K T S L S VD +W I +V
Sbjct: 290 LQNNYAHLTNSSINKSGASYEKIKEVIGHGCKWTLSRFFSYLRSWDVDDLLLWKKIHRMV 349
Query: 484 IKTVIALTPEL 494
I T++A+ P +
Sbjct: 350 ILTILAIAPSV 360
>gi|11068135 tubulin tyrosine ligase-like family, member 1 [Homo
sapiens]
Length = 423
Score = 100 bits (249), Expect = 3e-21
Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 38/248 (15%)
Query: 272 VNKFPGMTEMVRKITLSRAVRTMQNLFPEE---------------YNFYPRSWILPDEFQ 316
VN FP E+ RK + + ++ + +E +F P +++LP ++
Sbjct: 62 VNHFPNHYELTRKDLMVKNIKRYRKELEKEGSPLAEKDENGKYLYLDFVPVTYMLPADYN 121
Query: 317 LFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDIR----------LAGTLQS 366
LFV + + S T+I+KP G QG GI+LI S I+
Sbjct: 122 LFVEEFRK------SPSSTWIMKPCGKAQGKGIFLINKLSQIKKWSRDSKTSSFVSQSNK 175
Query: 367 RPAVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLH 426
V+ YI PLLI KFD+RLYVL+ + PL Y+ K G RFCT Y P+ L
Sbjct: 176 EAYVISLYINNPLLIGGRKFDLRLYVLVSTYRPLRCYMYKLGFCRFCTVKY-TPSTSELD 234
Query: 427 RIFMHLTNYSLNIHSGNFIHSDSASTGSKRTFSSILCRL-SSKGVDI-KKVWSDIISVVI 484
+F+HLTN ++ H ++ H G K T S++ L S++G ++ K++ +I +++
Sbjct: 235 NMFVHLTNVAIQKHGEDYNHIH----GGKWTVSNLRLYLESTRGKEVTSKLFDEIHWIIV 290
Query: 485 KTVIALTP 492
+++ A+ P
Sbjct: 291 QSLKAVAP 298
>gi|24308516 tubulin tyrosine ligase [Homo sapiens]
Length = 377
Score = 66.6 bits (161), Expect = 5e-11
Identities = 54/191 (28%), Positives = 87/191 (45%), Gaps = 32/191 (16%)
Query: 272 VNKFPGMTEMVRKITLSRAVRTMQNL------FPEEYNFYPRSWILP------------- 312
VN + G ++ RK +L + ++T L FPE Y YP + P
Sbjct: 62 VNYYRGADKLCRKASLVKLIKTSPELAESCTWFPESYVIYPTNLKTPVAPAQNGIQPPIS 121
Query: 313 ----DEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDIRLAGTLQSRP 368
DE + F+A K+D +I K G +G+GI + + S++ Q +
Sbjct: 122 NSRTDEREFFLASYNRKKEDGEG--NVWIAKSSAGAKGEGILISSEASELLDFIDNQGQV 179
Query: 369 AVVQEYICKPLLIDK--LKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLH 426
V+Q+Y+ PLL++ KFDIR +VL+ IY+ ++G+ R +EPY N
Sbjct: 180 HVIQKYLEHPLLLEPGHRKFDIRSWVLVDH--QYNIYLYREGVLRTASEPYH---VDNFQ 234
Query: 427 RIFMHLTNYSL 437
HLTN+ +
Sbjct: 235 DKTCHLTNHCI 245
>gi|109134340 tubulin tyrosine ligase-like family, member 3 [Homo
sapiens]
Length = 772
Score = 57.4 bits (137), Expect = 3e-08
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 314 EFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSD-IRLAG----TLQSRP 368
+ Q V Q+ M D + +IVKP +G GI + + ++L ++
Sbjct: 263 QLQAVVPQIDMEGD-----RNIWIVKPGAKSRGRGIMCMDHLEEMLKLVNGNPVVMKDGK 317
Query: 369 AVVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLHRI 428
VVQ+YI +PLLI KFD+R + L+ +PL ++ +D RF T+P+ + KNL
Sbjct: 318 WVVQKYIERPLLIFGTKFDLRQWFLVTDWNPLTVWFYRDSYIRFSTQPF---SLKNLDN- 373
Query: 429 FMHLTNYSLNIHSGNFIH 446
+HL N S+ H N H
Sbjct: 374 SVHLCNNSIQKHLENSCH 391
>gi|73476377 LBXCOR1 homolog [Homo sapiens]
Length = 921
Score = 51.6 bits (122), Expect = 2e-06
Identities = 60/182 (32%), Positives = 73/182 (40%), Gaps = 32/182 (17%)
Query: 32 PRLDAVTAAVNPSLSDHGNGLGRGT-------------RGSGCSGGSLVADWG----GGA 74
P L A P G G G G G+G GG++ WG G A
Sbjct: 368 PVLGAGEPKGGPGTGSGGGGAGTGGGAGGPGASHLPPGAGAGPGGGAMF--WGHQPSGAA 425
Query: 75 AAAAAVALALAPA-------LSTMRRGSSE--SELAARWEAEAVAAAKAAAKAEAEATAE 125
AAAVA A A A + GS S AA+ +A+AVAAA AAA A A A A
Sbjct: 426 KDAAAVAAAAAAATVYPTFPMFWPAAGSLPVPSYPAAQSQAKAVAAAVAAAAAAAAAAAG 485
Query: 126 TVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPPSKPKP 185
+ A + A A E A E P L+ P E+G + L P LPP P P
Sbjct: 486 SGAPEPLDGAEPAKESGLGAEERCPSALSRGPLD----EDGTDEALPPPLAPLPPPPPPP 541
Query: 186 VQ 187
+
Sbjct: 542 AR 543
>gi|56606131 tubulin tyrosine ligase-like family, member 9 [Homo
sapiens]
Length = 439
Score = 50.8 bits (120), Expect = 3e-06
Identities = 44/165 (26%), Positives = 74/165 (44%), Gaps = 26/165 (15%)
Query: 253 CDIYWHGVSF-HDNDIFSGQVNKFPGMTEMVRKITLSRAVRTMQNLFPEEY--------N 303
CD+ W +F H +++ F E+ RK + + ++ + E +
Sbjct: 78 CDVSWLRENFDHTYMDEHVRISHFRNHYELTRKNYMVKNLKRFRKQLEREAGKLEAAKCD 137
Query: 304 FYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIYLIKDPSDI----- 358
F+P+++ +P E+ LFV + + K+ +W I+KP QG GI+L + DI
Sbjct: 138 FFPKTFEMPCEYHLFVEEFR--KNPGITW----IMKPVARSQGKGIFLFRRLKDIVDWRK 191
Query: 359 ------RLAGTLQSRPAVVQEYICKPLLIDKLKFDIRLYVLLKSL 397
+ V Q YI P LI KFD+R+YVL+ S+
Sbjct: 192 DTRSSDDQKDDIPVENYVAQRYIENPYLIGGRKFDLRVYVLVMSV 236
>gi|170932550 FLT3-interacting zinc finger 1 [Homo sapiens]
Length = 496
Score = 47.4 bits (111), Expect = 3e-05
Identities = 51/176 (28%), Positives = 70/176 (39%), Gaps = 15/176 (8%)
Query: 30 PGPRLDAVTAA------VNPSLSDHGNGLGRGTRGSGCSGGSLVADWG-GGAAAAAAVAL 82
PGP L A++A V P G+G G G G G + WG AAAAAA +L
Sbjct: 140 PGPGLPALSAPCSVCCNVGPCSVCGGSGAGGGEGPEGAGAG--LGSWGLAEAAAAAAASL 197
Query: 83 ALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAEATAETVAEQVRV--DAGAAGE 140
+ RR ELAA W A + E + A + E+ ++ D G
Sbjct: 198 PPFACGACARRFDHGRELAAHWAAHTDVKPFKCPRCERDFNAPALLERHKLTHDLQGPGA 257
Query: 141 PECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPPS---KPKPVQGLCPHG 193
P +A P + +AAE G+ + L P+ PK + GL P G
Sbjct: 258 PPAQAWAAGPGAGPETAGEGTAAEAGDAPLASDRRLLLGPAGGGVPK-LGGLLPEG 312
>gi|194239681 tubulin tyrosine ligase-like family, member 10 isoform
1 [Homo sapiens]
Length = 673
Score = 46.6 bits (109), Expect = 6e-05
Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 34/160 (21%)
Query: 291 VRTMQNLFPEEYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIY 350
V M+ FPE Y L E + F + D+ W I KP QG GI+
Sbjct: 278 VLRMEEFFPETYRLD-----LKHEREAFFT----LFDETQIW----ICKPTASNQGKGIF 324
Query: 351 LIKDPSDIRL----AGTLQSRPA------------VVQEYICKPLLIDKLKFDIRLYVLL 394
L+++ ++ +++ P VVQ YI PLL+D KFD+R Y+L+
Sbjct: 325 LLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLI 384
Query: 395 KSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLHRIFMHLTN 434
P I+ G +R Y +P +L HLTN
Sbjct: 385 ACTTPYMIFFG-HGYARLTLSLY-DPHSSDLGG---HLTN 419
>gi|194239678 tubulin tyrosine ligase-like family, member 10 isoform
2 [Homo sapiens]
Length = 404
Score = 46.6 bits (109), Expect = 6e-05
Identities = 46/160 (28%), Positives = 67/160 (41%), Gaps = 34/160 (21%)
Query: 291 VRTMQNLFPEEYNFYPRSWILPDEFQLFVAQVQMVKDDDPSWKPTFIVKPDGGCQGDGIY 350
V M+ FPE Y L E + F + D+ W I KP QG GI+
Sbjct: 205 VLRMEEFFPETYRLD-----LKHEREAFFT----LFDETQIW----ICKPTASNQGKGIF 251
Query: 351 LIKDPSDIRL----AGTLQSRPA------------VVQEYICKPLLIDKLKFDIRLYVLL 394
L+++ ++ +++ P VVQ YI PLL+D KFD+R Y+L+
Sbjct: 252 LLRNQEEVAALQAKTRSMEDDPIHHKTPFRGPQARVVQRYIQNPLLVDGRKFDVRSYLLI 311
Query: 395 KSLDPLEIYIAKDGLSRFCTEPYQEPTPKNLHRIFMHLTN 434
P I+ G +R Y +P +L HLTN
Sbjct: 312 ACTTPYMIFFG-HGYARLTLSLY-DPHSSDLGG---HLTN 346
>gi|4506975 solute carrier family 12 (sodium/potassium/chloride
transporters), member 2 [Homo sapiens]
Length = 1212
Score = 44.3 bits (103), Expect = 3e-04
Identities = 49/168 (29%), Positives = 66/168 (39%), Gaps = 24/168 (14%)
Query: 2 AAAASVTGRVTWAASPMRSLGLGRRLSLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSGC 61
A ++ G +P + R+ LPG + +V P+ D G G R G
Sbjct: 7 APSSGAPGLAGVGETPSAAALAAARVELPGTAVPSVPEDAAPASRDGG-----GVRDEG- 60
Query: 62 SGGSLVADWGGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAE 121
AAA + L P S R + +L + A AAA AAA A A
Sbjct: 61 -----------PAAAGDGLGRPLGPTPSQSR---FQVDLVSENAGRAAAAAAAAAAAAAA 106
Query: 122 ATAETVAEQVRVDAGAAGEPECKAGEEQPK----VLAPAPAQPSAAEE 165
A A A+Q D A+GE E G E+ K V PA S+AE+
Sbjct: 107 AGAGAGAKQTPADGEASGESEPAKGSEEAKGRFRVNFVDPAASSSAED 154
>gi|45439359 triple functional domain (PTPRF interacting) [Homo
sapiens]
Length = 3097
Score = 43.9 bits (102), Expect = 4e-04
Identities = 51/187 (27%), Positives = 73/187 (39%), Gaps = 37/187 (19%)
Query: 34 LDAVTAAVNPSLSDHGNGLGRGTRGSGCSGGSLVADWGGGAAAAAAVALALAP-----AL 88
L+A+T+ + + G G G G+ GSG GGS GGG A + + P A
Sbjct: 2277 LNALTSPIEYQRNHSGGGGGGGSGGSGGGGGS-----GGGGAPSGGSGHSGGPSSCGGAP 2331
Query: 89 STMRRGSSESELAARWEAEAVAAAKAAAKAEAEATAETVAEQVRVDAGAAGEPECKAGEE 148
ST R S R + ++ A+++AEA+ + T G + P A E
Sbjct: 2332 STSRSRPSRIPQPVRHHPPVLVSSAASSQAEADKMSGTST------PGPSLPPPGAAPEA 2385
Query: 149 QPKVLAPAPAQPSAAEEGN---------TQVLQRP----------PPTLPPSKPKPVQGL 189
P AP+ P A EG+ +VL+ P P P + G
Sbjct: 2386 GPS--APSRRPPGADAEGSEREAEPIPKMKVLESPRKGAANASGSSPDAPAKDARASLGT 2443
Query: 190 CPHGKPR 196
P GKPR
Sbjct: 2444 LPLGKPR 2450
>gi|11056036 tubulin tyrosine ligase-like family, member 12 [Homo
sapiens]
Length = 644
Score = 43.9 bits (102), Expect = 4e-04
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 15/140 (10%)
Query: 272 VNKFPGMTEMVRKITLSRAVRTMQNLFPEEYNFYPRSWILPDEFQLFVAQVQMVK--DDD 329
+N+FP + K L+ R PE + PR++ L E FV+ Q + +D
Sbjct: 356 LNQFPCENLLTVKDCLASIARRAGG--PEGPPWLPRTFNLRTELPQFVSYFQQRERWGED 413
Query: 330 PSWKPTFIVKPDGGCQGDGIYLIKDPSDIRLAGTLQSRPAVVQEYICKPLL-----IDKL 384
W I KP + ++ K I +S P VV +YI P+L + K+
Sbjct: 414 NHW----ICKPWNLARSLDTHVTKSLHSI--IRHRESTPKVVSKYIESPVLFLREDVGKV 467
Query: 385 KFDIRLYVLLKSLDPLEIYI 404
KFDIR VLL+S+ PL +++
Sbjct: 468 KFDIRYIVLLRSVRPLRLFV 487
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 43.1 bits (100), Expect = 6e-04
Identities = 53/183 (28%), Positives = 65/183 (35%), Gaps = 33/183 (18%)
Query: 29 LPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSGCSGGSLVADWGGGAAAAAAVALALAPAL 88
LPG L A + V+ + G G G G G G G G+AA + A P+
Sbjct: 10 LPGNSLLAAGSIVHSDAAGAGGGGGGGGGGGGGGAGGGGGGMQPGSAAVTSGAYRGDPSS 69
Query: 89 STM------------RRGSSESELAARWEA---EAVAAAKAAAKAEAEATAETVAEQVRV 133
M G A +W A AAA AAA A EA++ V
Sbjct: 70 VKMVQSDFMQGAMAASNGGHMLSHAHQWVTALPHAAAAAAAAAAAAVEASSPWSGSAV-- 127
Query: 134 DAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEG--------NTQVLQRPPPTLPPSKPKP 185
G AG P +QP P P Q + G T + R PP L P P P
Sbjct: 128 --GMAGSP------QQPPQPPPPPPQGPDVKGGAGRDDLHAGTALHHRGPPHLGPPPPPP 179
Query: 186 VQG 188
QG
Sbjct: 180 HQG 182
>gi|122937293 tubulin tyrosine ligase-like family, member 8 [Homo
sapiens]
Length = 834
Score = 42.4 bits (98), Expect = 0.001
Identities = 22/48 (45%), Positives = 30/48 (62%)
Query: 370 VVQEYICKPLLIDKLKFDIRLYVLLKSLDPLEIYIAKDGLSRFCTEPY 417
VVQ+YI PLLI KFDIR + L+ +PL I+ K+ RF T+ +
Sbjct: 374 VVQKYIETPLLICDTKFDIRQWFLVTDWNPLTIWFYKESYLRFSTQRF 421
>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
Length = 651
Score = 41.2 bits (95), Expect = 0.002
Identities = 49/154 (31%), Positives = 56/154 (36%), Gaps = 17/154 (11%)
Query: 47 DHGNGLGRGTRGSGCSGGSLVADWGGGAAAAAAVALALAPALSTMRRGSSESELAARW-- 104
D G G G G G G +G D G G A A APA R E + AA
Sbjct: 9 DGGGGGGGGGGGVGAAG----EDPGPGPAPPPEGAQEAAPA----PRPPPEPDDAAAALR 60
Query: 105 ----EAEAVAAAKAAAKAEAEATAETVAEQVRVDAGAAGEPECKAGEEQ--PKVLAPAPA 158
+ A+ A E A + A D GAA EP G E P LAPA A
Sbjct: 61 LALDQLSALGLGGAGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTLAPAVA 120
Query: 159 QPSAAEEGNTQVLQRPPPTLPPSKPKPVQGLCPH 192
P + + PPP PS P G PH
Sbjct: 121 -PGSLPLLDPNASPPPPPPPRPSPPDVFAGFAPH 153
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 40.8 bits (94), Expect = 0.003
Identities = 39/119 (32%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 74 AAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAEATAETVAEQVRV 133
AA AAA+ A +TM +AA A A AAA AAA A + ATA A V
Sbjct: 481 AATAAAITATAATITTTM--------VAAAPVAVAAAAAPAAAAAPSPATAAATA--AAV 530
Query: 134 DAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTL-PPSKPKPVQGLCP 191
AAG+ A +AP+ A +A + P P L P P Q P
Sbjct: 531 SPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAP 589
Score = 39.3 bits (90), Expect = 0.009
Identities = 39/113 (34%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 74 AAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAK-AEAEATAETVAEQVR 132
AAA AVA A APA + ++ + AA A AAA A A A A + A
Sbjct: 500 AAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAA 559
Query: 133 VDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPPSKPKP 185
V A A P V APA AQ SA + TQ P P P P
Sbjct: 560 VQVAPAAPAPVPAPALVP-VPAPAAAQASAPAQ--TQAPTSAPAVAPTPAPTP 609
Score = 34.7 bits (78), Expect = 0.23
Identities = 37/111 (33%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 75 AAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAEATAETVAEQVRVD 134
AAA A A++ A A S S A A A AA + A A A A + V V
Sbjct: 523 AAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPAL---VPVP 579
Query: 135 AGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPPSKPKP 185
A AA + A + P APA A P+ A V Q P P + P P
Sbjct: 580 APAAAQASAPAQTQAP-TSAPAVA-PTPAPTPTPAVAQAEVPASPATGPGP 628
>gi|166064029 angiomotin isoform 1 [Homo sapiens]
Length = 1084
Score = 40.8 bits (94), Expect = 0.003
Identities = 39/119 (32%), Positives = 48/119 (40%), Gaps = 11/119 (9%)
Query: 74 AAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAEATAETVAEQVRV 133
AA AAA+ A +TM +AA A A AAA AAA A + ATA A V
Sbjct: 890 AATAAAITATAATITTTM--------VAAAPVAVAAAAAPAAAAAPSPATAAATA--AAV 939
Query: 134 DAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTL-PPSKPKPVQGLCP 191
AAG+ A +AP+ A +A + P P L P P Q P
Sbjct: 940 SPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASAP 998
Score = 39.3 bits (90), Expect = 0.009
Identities = 39/113 (34%), Positives = 45/113 (39%), Gaps = 4/113 (3%)
Query: 74 AAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAK-AEAEATAETVAEQVR 132
AAA AVA A APA + ++ + AA A AAA A A A A + A
Sbjct: 909 AAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAA 968
Query: 133 VDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPPSKPKP 185
V A A P V APA AQ SA + TQ P P P P
Sbjct: 969 VQVAPAAPAPVPAPALVP-VPAPAAAQASAPAQ--TQAPTSAPAVAPTPAPTP 1018
Score = 34.7 bits (78), Expect = 0.23
Identities = 37/111 (33%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 75 AAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAEATAETVAEQVRVD 134
AAA A A++ A A S S A A A AA + A A A A + V V
Sbjct: 932 AAATAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPAL---VPVP 988
Query: 135 AGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLPPSKPKP 185
A AA + A + P APA A P+ A V Q P P + P P
Sbjct: 989 APAAAQASAPAQTQAP-TSAPAVA-PTPAPTPTPAVAQAEVPASPATGPGP 1037
>gi|239755810 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 40.0 bits (92), Expect = 0.005
Identities = 54/223 (24%), Positives = 83/223 (37%), Gaps = 41/223 (18%)
Query: 17 PMRS---LGLGRRLSLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSGCSGGSLVADW--- 70
P+RS LG G R PR A+ A PS + G GRGT G+G L+ +
Sbjct: 262 PLRSGPPLGAGSR-----PR--ALCPAQTPSQASSSGG-GRGTSGAGEGHQHLLITYRVL 313
Query: 71 --------GGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAEA 122
GG A+ +++ +R G + + W+ A +
Sbjct: 314 SNLRRTLCSGGGVASMRISVGRG-----LRAGPRAPDAGSFWDPNPQTLAPHPQASRRPR 368
Query: 123 TAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLP--- 179
+++ Q G AG P + AP+P + + +V +RP P P
Sbjct: 369 AGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAEL 428
Query: 180 ---PSKPKPVQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPV 219
S P+P+ L P R+ +SSGH S RP+
Sbjct: 429 NPATSSPRPLGPLRP--------RAGGQSSGHPDRTVTSPRPI 463
>gi|239750310 PREDICTED: hypothetical protein [Homo sapiens]
Length = 499
Score = 40.0 bits (92), Expect = 0.005
Identities = 54/223 (24%), Positives = 83/223 (37%), Gaps = 41/223 (18%)
Query: 17 PMRS---LGLGRRLSLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSGCSGGSLVADW--- 70
P+RS LG G R PR A+ A PS + G GRGT G+G L+ +
Sbjct: 262 PLRSGPPLGAGSR-----PR--ALCPAQTPSQASSSGG-GRGTSGAGEGHQHLLITYRVL 313
Query: 71 --------GGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAEA 122
GG A+ +++ +R G + + W+ A +
Sbjct: 314 SNLRRTLCSGGGVASMRISVGRG-----LRAGPRAPDAGSFWDPNPQTLAPHPQASRRPR 368
Query: 123 TAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLP--- 179
+++ Q G AG P + AP+P + + +V +RP P P
Sbjct: 369 AGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAEL 428
Query: 180 ---PSKPKPVQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPV 219
S P+P+ L P R+ +SSGH S RP+
Sbjct: 429 NPATSSPRPLGPLRP--------RAGGQSSGHPDRTVTSPRPI 463
>gi|239744621 PREDICTED: hypothetical protein [Homo sapiens]
Length = 536
Score = 40.0 bits (92), Expect = 0.005
Identities = 54/223 (24%), Positives = 83/223 (37%), Gaps = 41/223 (18%)
Query: 17 PMRS---LGLGRRLSLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSGCSGGSLVADW--- 70
P+RS LG G R PR A+ A PS + G GRGT G+G L+ +
Sbjct: 299 PLRSGPPLGAGSR-----PR--ALCPAQTPSQASSSGG-GRGTSGAGEGHQHLLITYRVL 350
Query: 71 --------GGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAEA 122
GG A+ +++ +R G + + W+ A +
Sbjct: 351 SNLRRTLCSGGGVASMRISVGRG-----LRAGPRAPDAGSFWDPNPQTLAPHPQASRRPR 405
Query: 123 TAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPPTLP--- 179
+++ Q G AG P + AP+P + + +V +RP P P
Sbjct: 406 AGCSLSLQPPHQRGLRDGCPSAAGRLSPALPAPSPREVTLGSHVPARVSRRPCPPTPAEL 465
Query: 180 ---PSKPKPVQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPV 219
S P+P+ L P R+ +SSGH S RP+
Sbjct: 466 NPATSSPRPLGPLRP--------RAGGQSSGHPDRTVTSPRPI 500
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 39.7 bits (91), Expect = 0.007
Identities = 39/107 (36%), Positives = 45/107 (42%), Gaps = 6/107 (5%)
Query: 62 SGGSLVAD-----WGGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAA 116
+GG LVAD G AAAAAA A A A A + + AA AAA AAA
Sbjct: 22 NGGGLVADELNKNMEGAAAAAAAAA-AAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAA 80
Query: 117 KAEAEATAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAA 163
A A +A + GAA GE P A A A +AA
Sbjct: 81 AAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAA 127
Score = 35.4 bits (80), Expect = 0.13
Identities = 37/131 (28%), Positives = 51/131 (38%), Gaps = 6/131 (4%)
Query: 28 SLPGPRLDAVTAAVNPSLSDHGNGLGRGTRGSGCSGGSLVADWGGGAAAAAAVALALAPA 87
++ G A AA + G G + S+ A AAAAA L
Sbjct: 34 NMEGAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAANQCRNLMAH 93
Query: 88 LSTMRRGSSESELAARWEAEAVAAAKAAAKAEAEATAETVAEQVRVDAGAAGEPECKAGE 147
+ + G++ + +A EA AAA AAA A A A A + +G G P AG
Sbjct: 94 PAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAAS-----SSGGPG-PAGPAGA 147
Query: 148 EQPKVLAPAPA 158
E K +P A
Sbjct: 148 EAAKQCSPCSA 158
Score = 31.2 bits (69), Expect = 2.5
Identities = 28/90 (31%), Positives = 34/90 (37%), Gaps = 8/90 (8%)
Query: 94 GSSESELAARWEAEAVAAAKAAAKAEAEA--------TAETVAEQVRVDAGAAGEPECKA 145
G EL E A AAA AAA A A A A V A AA A
Sbjct: 25 GLVADELNKNMEGAAAAAAAAAAAAAAGAGGGGFPHPAAAAAGGNFSVAAAAAAAAAAAA 84
Query: 146 GEEQPKVLAPAPAQPSAAEEGNTQVLQRPP 175
+ + + PAP P AA ++ + PP
Sbjct: 85 NQCRNLMAHPAPLAPGAASAYSSAPGEAPP 114
>gi|210032509 hypothetical protein LOC100130302 [Homo sapiens]
Length = 887
Score = 39.7 bits (91), Expect = 0.007
Identities = 35/114 (30%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 62 SGGSLVADWGGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAE 121
+G L + AA AAA A A A A + + + AA A A AAA A A A A
Sbjct: 485 AGSPLKRPFSAAAAIAAAAAAAAAAAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAP 544
Query: 122 ATAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPP 175
A A A V A AA + ++P V ++P A + T+ ++ P
Sbjct: 545 APAPAAAPAVAA-APAAAASAAPSHSQKPSVPLIQASRPCPAAQPPTKFIKIAP 597
Score = 33.1 bits (74), Expect = 0.66
Identities = 36/105 (34%), Positives = 42/105 (40%), Gaps = 11/105 (10%)
Query: 98 SELAARWEAEAVAAAKAAAKAEAEATAETVAEQVRVDAGAAGEPECKAGEEQPKVLAPAP 157
S AA A A AAA AAA A A A A +A AA P A A AP
Sbjct: 494 SAAAAIAAAAAAAAA-AAAAAAAAAPAPALAAAAAPALAAAAAPALAAAAAPAPAPAAAP 552
Query: 158 ---AQPSAAEEGNTQVLQRPP-PTLPPSKPKPVQGLCPHGKPRDK 198
A P+AA Q+P P + S+P CP +P K
Sbjct: 553 AVAAAPAAAASAAPSHSQKPSVPLIQASRP------CPAAQPPTK 591
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 39.3 bits (90), Expect = 0.009
Identities = 41/161 (25%), Positives = 59/161 (36%), Gaps = 17/161 (10%)
Query: 70 WGGGAAAAAAVALALAPALSTMRRGSSESELAARWEAEAVAAAKAAAKAEAEATAETVAE 129
W G+A +A A A APA + GS+ L EA + E A E
Sbjct: 62 WVPGSAETSAPAPAPAPAPAPAVTGSTVVVLTLEASPEAPKPQLPSGPESPEPAAVAGVE 121
Query: 130 QVRVDAGAAGEPECKAGEEQPKVLAPAPAQPSAAEEGNTQVLQRPPP----TLPPSKPKP 185
R A A P+ + P AP P P+ T+ R P PP PKP
Sbjct: 122 TSRALAAGADSPKTEEARPSP---APGPGTPTGTP---TRTPSRTAPGALTAKPPLAPKP 175
Query: 186 VQGLCPHGKPRDKGRSCKRSSGHGSGENGSQRPVTVDSSKA 226
G G + + +SG +G +G+ + + +A
Sbjct: 176 -------GTTVASGVTARSASGQVTGGHGAAAATSASAGQA 209
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,666,072
Number of Sequences: 37866
Number of extensions: 1196502
Number of successful extensions: 9844
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 434
Number of HSP's that attempted gapping in prelim test: 8121
Number of HSP's gapped (non-prelim): 1666
length of query: 538
length of database: 18,247,518
effective HSP length: 107
effective length of query: 431
effective length of database: 14,195,856
effective search space: 6118413936
effective search space used: 6118413936
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.